RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZBTB37Q5TC79 503 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF431Q8TF32 576 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 RFKQ969G6 155 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 BBS4Q96RK4 519 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 AICDAQ9GZX7 198 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 BTBD1Q9H0C5 482 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 LMAN2LQ9H0V9 348 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 KLHL31Q9H511 634 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 MED20Q9H944 212 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ADAM30Q9UKF2 790 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 CBLCQ9ULV8 474 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 USP34Q70CQ2 3546 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ENPP1P22413 925 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 AHRP35869 848 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ATP12AP54707 1039 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 PER3P56645 1201 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 TOR2AQ5JU69 321 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF793Q6ZN11 406 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NATD1Q8N6N6 113 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 OR2L2Q8NH16 312 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NUS1Q96E22 293 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 DHRS9Q9BPW9 319 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NUDT15Q9NV35 164 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CHST2Q9Y4C5 530 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 HEATR5BQ9P2D3 2071 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 TRIOO75962 3097 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NUMA1Q14980 2115 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ANTXRLA6NF34 631 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 RNF13O43567 381 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CXCL3P19876 107 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 BTCP35070 178 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 SSR2P43308 183 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 KHKP50053 298 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CCR8P51685 355 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 TRAM2Q15035 370 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 OR4C11Q6IEV9 310 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 TMEM107Q6UX40 140 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 C12orf40Q86WS4 652 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF655Q8N720 491 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 HSD17B8Q92506 261 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ABHD1Q96SE0 405 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 SMAD5Q99717 465 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ZCCHC2Q9C0B9 1178 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 DPEP2Q9H4A9 486 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ZFP64Q9NPA5 681 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 B3GNT2Q9NY97 397 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF624Q9P2J8 865 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 CLEC4AQ9UMR7 237 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 POLHQ9Y253 713 aa13.19□□□□□ -0.3
CLCNKA-202ENST00000375692 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 CHST10O43529 356 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 IGHA1P01876 353 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 THY1P04216 161 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 HK1P19367 917 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 TAS2R38P59533 333 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 DHCR24Q15392 516 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 LRRC17Q8N6Y2 441 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 OR6C4Q8NGE1 309 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 OR5M3Q8NGP4 307 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 DIO2Q92813 273 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 CCDC120Q96HB5 630 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 TRAF4Q9BUZ4 470 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 PINK1Q9BXM7 581 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 FOLH1BQ9HBA9 442 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 RASD1Q9Y272 281 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 EXOGQ9Y2C4 368 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SPEF1Q9Y4P9 236 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 LOC105369274A0A096LPK9 316 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 BTN3A3O00478 584 aa13.18□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC22A5O76082 557 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms