RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SEC23BQ15437 767 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 RGNQ15493 299 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 HIST2H2ACQ16777 129 aaPredicted RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 MEP1AQ16819 746 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 IQCCQ4KMZ1 466 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 TCEAL5Q5H9L2 206 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 GCNT6Q5T4J0 391 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 C9orf64Q5T6V5 341 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 GPR107Q5VW38 600 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 HIST2H2AA3Q6FI13 130 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 RAET1GQ6H3X3 334 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 FAM71E1Q6IPT2 247 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ADNP2Q6IQ32 1131 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ANKRD26P1Q6NSI1 321 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 LINC00299Q6ZSB3 139 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CCDC80Q76M96 950 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ERN2Q76MJ5 926 aaKnown RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 COMMD6Q7Z4G1 85 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 UBE2Q1Q7Z7E8 422 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 DSG4Q86SJ6 1040 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CYP4Z1Q86W10 505 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 TRAPPC5Q8IUR0 188 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ZNF547Q8IVP9 402 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 DCUN1D3Q8IWE4 304 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 SLC30A8Q8IWU4 369 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CFAP206Q8IYR0 622 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 METTL4Q8N3J2 472 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ESX1Q8N693 406 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 NATD1Q8N6N6 113 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ATG16L2Q8NAA4 619 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 C11orf65Q8NCR3 313 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 OR4A15Q8NGL6 344 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 OR2L2Q8NH16 312 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CDC26Q8NHZ8 85 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 C16orf78Q8WTQ4 265 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ING5Q8WYH8 240 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 HERVK_113Q902F9 699 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 RAD51AP1Q96B01 352 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 COX14Q96I36 57 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 C7orf34Q96L11 122 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 NODALQ96S42 347 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 EPYCQ99645 322 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 GDF15Q99988 308 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 APOL4Q9BPW4 351 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 DOHHQ9BU89 302 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 WRAP53Q9BUR4 548 aaKnown RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 GABARAPL3Q9BY60 117 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 OR2AG1Q9H205 316 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 OR52A5Q9H2C5 316 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ADNPQ9H2P0 1102 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 RHBGQ9H310 441 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 TMEM245Q9H330 911 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 DUSP21Q9H596 190 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 TMEM38AQ9H6F2 299 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 REEP1Q9H902 201 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 PELI2Q9HAT8 420 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 FANCEQ9HB96 536 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 PALMDQ9NP74 551 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CCNB1IP1Q9NPC3 277 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 OBP2BQ9NPH6 170 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 CCDC177Q9NQR7 707 aaPredicted RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 THSD1Q9NS62 852 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ADPRHL2Q9NX46 363 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 SPATA7Q9P0W8 599 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 LRFN1Q9P244 771 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 DEC1Q9P2X7 70 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ENPP5Q9UJA9 477 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 ITGB1BP2Q9UKP3 347 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 BAG5Q9UL15 447 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 PSME2Q9UL46 239 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 FZD4Q9ULV1 537 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 EXO1Q9UQ84 846 aaKnown RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 ERVK-11Q9UQG0 969 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 PADI2Q9Y2J8 665 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 SAMHD1Q9Y3Z3 626 aaKnown RBP4.49□□□□□ -1.69
USP48-202ENST00000374730 SNX5Q9Y5X3 404 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 NINQ8N4C6 2090 aa4.49□□□□□ -1.69
USP48-202ENST00000374730 SNRNP200O75643 2136 aaKnown RBP4.48□□□□□ -1.69
USP48-202ENST00000374730 A0A0J9YVX5 310 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 A0A1W2PPW3 197 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 hCG_2039718K7EN88 272 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 ADAM10O14672 748 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 ADAMDEC1O15204 470 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 MITFO75030 526 aaPredicted RBP4.48□□□□□ -1.69
USP48-202ENST00000374730 POP7O75817 140 aaKnown RBP4.48□□□□□ -1.69
USP48-202ENST00000374730 GABARAPO95166 117 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 KRT75O95678 551 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 C1QCP02747 245 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 MT-ND5P03915 603 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 RPN2P04844 631 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 DDX5P17844 614 aaKnown RBP4.48□□□□□ -1.69
USP48-202ENST00000374730 EFNA1P20827 205 aaPredicted RBP4.48□□□□□ -1.69
USP48-202ENST00000374730 MATN1P21941 496 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 PRKACGP22612 351 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 HSD17B2P37059 387 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 RAD52P43351 418 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 GSTM5P46439 218 aa4.48□□□□□ -1.69
USP48-202ENST00000374730 LBX1P52954 281 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms