RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PRAMEF33A0A0G2JMD5 474 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1W2PRG6 482 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TRIM64CA6NLI5 447 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 A8MV72 311 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 YKT6O15498 198 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 PRAMEF10O60809 474 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NDUFB2O95178 105 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CD22P20273 847 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CASRP41180 1078 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 GIPRP48546 466 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 BLVRAP53004 296 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MAZP56270 477 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 PRPS1P60891 318 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 RPS3AP61247 264 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 KCNJ10P78508 379 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 EMX1Q04741 257 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NR0B2Q15466 257 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 KCNJ8Q15842 424 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MFSD12Q6NUT3 480 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF547Q8IVP9 402 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 UBE2J2Q8N2K1 259 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF676Q8N7Q3 588 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC22A8Q8TCC7 542 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CREB3L4Q8TEY5 395 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 C11orf24Q96F05 449 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC6A18Q96N87 628 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 STACQ99469 402 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 DEFB126Q9BYW3 111 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 RBM38Q9H0Z9 239 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ABCB9Q9NP78 766 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MED17Q9NVC6 651 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 COMMD3Q9UBI1 195 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ERVK-19Q9WJR5 959 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 B3GNT3Q9Y2A9 372 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MMACHCQ9Y4U1 282 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC22A7Q9Y694 548 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TRPM6Q9BX84 2022 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 C2orf92A0A1B0GVN3 265 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1W2PR48 441 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ISPDA4D126 451 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ANXA2P2A6NMY6 339 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 C2CD4DB7Z1M9 353 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NPIPA5E9PKD4 350 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 H0Y8X5 98 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 KHNYNO15037 678 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CTNSO60931 367 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TSPAN9O75954 239 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 EFEMP2O95967 443 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ANXA2P07355 339 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 UBL4AP11441 157 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CKMT1AP12532 417 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CELP19835 753 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CHMP24386 653 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 EDNRAP25101 427 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MNDAP41218 407 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NR4A2P43354 598 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC9A3P48764 834 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 DNASE1L1P49184 302 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 LIM2P55344 173 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SPCS2Q15005 226 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MLC1Q15049 377 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ENTPD8Q5MY95 495 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 IDNKQ5T6J7 187 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CCBE1Q6UXH8 406 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SYT13Q7L8C5 426 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 PTOV1Q86YD1 416 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 B3GNT7Q8NFL0 401 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 BAHD1Q8TBE0 780 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 HAVCR2Q8TDQ0 301 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 LMF2Q9BU23 707 aaKnown RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 TMED9Q9BVK6 235 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 IRF2BPLQ9H1B7 796 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CLEC4MQ9H2X3 399 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 GPN2Q9H9Y4 310 aaPredicted RBP4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF304Q9HCX3 659 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 BCL2L10Q9HD36 194 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 DUSP22Q9NRW4 184 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 STARD5Q9NSY2 213 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 CUTCQ9NTM9 273 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 NPIPA1Q9UND3 350 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 SIT1Q9Y3P8 196 aa4.98□□□□□ -1.61
SMNDC1-202ENST00000369603 MYO10Q9HD67 2058 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF726A6NNF4 738 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PEX12O00623 359 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 LCMT2O60294 686 aaKnown RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP5CP53041 499 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 WNT4P56705 351 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP3R1P63098 170 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 HSD11B2P80365 405 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 TEKQ02763 1124 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 LIPKQ5VXJ0 399 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 C8orf82Q6P1X6 216 aaPredicted RBP4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 RPTNQ6XPR3 784 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 KRT74Q7RTS7 529 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 VRK2Q86Y07 508 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 DNAJC22Q8N4W6 341 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 MS4A15Q8N5U1 240 aa4.97□□□□□ -1.61
SMNDC1-202ENST00000369603 ASCC1Q8N9N2 400 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms