RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SAXO2Q658L1 398 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM198Q66K66 360 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SLC25A25Q6KCM7 469 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 USP53Q70EK8 1073 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SHFQ7M4L6 423 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 HIPK1Q86Z02 1210 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 PRR14Q9BWN1 585 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ASB8Q9H765 288 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SMURF1Q9HCE7 757 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 DYRK4Q9NR20 520 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ADAM30Q9UKF2 790 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CDV3Q9UKY7 258 aaKnown RBP6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ICKQ9UPZ9 632 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 CBY1Q9Y3M2 126 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 SESN1Q9Y6P5 492 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 U3KQV3 271 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 HCFC1P51610 2035 aa6.42□□□□□ -1.38
CSDE1-204ENST00000369530 ANKRD12Q6UB98 2062 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 A0A1W2PQ09 198 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 VSTM2BA6NLU5 285 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 K7ENP7 123 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 BRINP1O60477 761 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 DLX3O60479 287 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 GUCA1CO95843 209 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RAP2AP10114 183 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PAX1P15863 534 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 HRH2P25021 359 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PTAFRP25105 342 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 AKT1P31749 480 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SOX11P35716 441 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RFC3P40938 356 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CAPZA2P47755 286 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ACTR1AP61163 376 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PSPHP78330 225 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 QPRTQ15274 297 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 GUCA2BQ16661 112 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 IMPG1Q17R60 797 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 FCRL6Q6DN72 434 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MRPL14Q6P1L8 145 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 INO80CQ6PI98 192 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 BLOC1S3Q6QNY0 202 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 KRT73Q86Y46 540 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CILP2Q8IUL8 1156 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 LILRA3Q8N6C8 439 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PTGR2Q8N8N7 351 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 STYXQ8WUJ0 223 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM41AQ96HV5 264 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 GPR21Q99679 349 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MRPL57Q9BQC6 102 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MND1Q9BWT6 205 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 DPH1Q9BZG8 443 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PPIL3Q9H2H8 161 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 LRRN3Q9H3W5 708 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 DDX31Q9H8H2 851 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 FOLH1BQ9HBA9 442 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RBFOX1Q9NWB1 397 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 FOXJ2Q9P0K8 574 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 NCDNQ9UBB6 729 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ASB1Q9Y576 335 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ARHGAP21Q5T5U3 1957 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 A0A087X1B8 175 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 IQCF5A8MTL0 148 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 UBE2CO00762 179 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ALDH4A1P30038 563 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CCR7P32248 378 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 GPX4P36969 197 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ALDH9A1P49189 494 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CLDN6P56747 220 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SNRPD2P62316 118 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ALDH6A1Q02252 535 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PIGFQ07326 219 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 KCNAB2Q13303 367 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 POU4F3Q15319 338 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RBBP7Q16576 425 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SNX20Q7Z614 316 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SLC37A2Q8TED4 501 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TMBIM1Q969X1 311 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CCDC74AQ96AQ1 378 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CREB3L1Q96BA8 519 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 POM121Q96HA1 1249 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 NSMCE2Q96MF7 247 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 TCEAL7Q9BRU2 100 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 WRAP53Q9BUR4 548 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 MMP28Q9H239 520 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ZFYVE1Q9HBF4 777 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SEMA4BQ9NPR2 832 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 RAD18Q9NS91 495 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ING1Q9UK53 422 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 PPIEQ9UNP9 301 aaKnown RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 WIPF3A6NGB9 483 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 ANKRD28O15084 1053 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 EIF3GO75821 320 aaKnown RBP eCLIP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 SIX3O95343 332 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-204ENST00000369530 HEXAP06865 529 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 CSF3P09919 207 aa6.41□□□□□ -1.38
CSDE1-204ENST00000369530 HSMCR30P0CW71 290 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms