RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CATSPER1Q8NEC5 780 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 SPPL2AQ8TCT8 520 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 PAQR8Q8TEZ7 354 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 NODALQ96S42 347 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 SECISBP2Q96T21 854 aaKnown RBP13.99□□□□□ -0.17
TPM1-206ENST00000358278 BTBD10Q9BSF8 475 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 SLC38A1Q9H2H9 487 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 CACYBPQ9HB71 228 aaKnown RBP13.99□□□□□ -0.17
TPM1-206ENST00000358278 KLHL1Q9NR64 748 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 SACM1LQ9NTJ5 587 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 FLRT3Q9NZU0 649 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 CNIH4Q9P003 139 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 USP22Q9UPT9 525 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 PCDHGA10Q9Y5H3 936 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 NCKAP5O14513 1909 aa13.99□□□□□ -0.17
TPM1-206ENST00000358278 TRAV17A0A0B4J275 112 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 ELOVL7A1L3X0 281 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PRAMEF25A6NGN4 478 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SCDO00767 359 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 ZIC2O95409 532 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 AQP1P29972 269 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PCGF2P35227 344 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 CLK3P49761 638 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 ZNF766Q5HY98 468 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 INTS11Q5TA45 600 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 PRAMEF8Q5VWM4 474 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PRAMEF7Q5VXH5 474 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SLC30A8Q8IWU4 369 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 TMEM178AQ8NBL3 297 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 TNIP2Q8NFZ5 429 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 BBS10Q8TAM1 723 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 TBL1XR1Q9BZK7 514 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 HOXD1Q9GZZ0 328 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 ABCG2Q9UNQ0 655 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 KMT2BQ9UMN6 2715 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 SPENQ96T58 3664 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 ZFYVE26Q68DK2 2539 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 A0A0G2JPF8 293 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PRORSD1PA6NEY8 169 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 HNRNPCL2B2RXH8 293 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 HNRNPCL3B7ZW38 293 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 GSTA4O15217 222 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SCO2O43819 266 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PGM3O95394 542 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 OXSR1O95747 527 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 GUSBP08236 651 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 HNRNPCL4P0DMR1 293 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SFTPCP11686 197 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 TCN1P20061 433 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 TBXA2RP21731 343 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 ATP12AP54707 1039 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 BICRALQ6AI39 1079 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 KRT73Q86Y46 540 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 PEX5LQ8IYB4 626 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 MICU2Q8IYU8 434 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 ARHGAP24Q8N264 748 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 EXD3Q8N9H8 876 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 OR4C3Q8NH37 302 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 GRHL3Q8TE85 626 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 DOHHQ9BU89 302 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 HES7Q9BYE0 225 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 SAP130Q9H0E3 1048 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 QRSL1Q9H0R6 528 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 MTHFD2LQ9H903 347 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 SH2D2AQ9NP31 389 aa13.98□□□□□ -0.17
TPM1-206ENST00000358278 GMPR2Q9P2T1 348 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 PRPF19Q9UMS4 504 aaKnown RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
TPM1-206ENST00000358278 G3V3Y1 287 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 KALRNO60229 2985 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 SP1P08047 785 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 NGFRP08138 427 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 CASP3P42574 277 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 GPR85P60893 370 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 KCNJ2P63252 427 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 ZNF169Q14929 603 aaPredicted RBP13.97□□□□□ -0.17
TPM1-206ENST00000358278 TBCELQ5QJ74 424 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 PDZK1Q5T2W1 519 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 SLC25A25Q6KCM7 469 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 GALNTL5Q7Z4T8 443 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 HMGN2P46Q86SG4 172 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 RBMXL3Q8N7X1 1067 aaKnown RBP13.97□□□□□ -0.17
TPM1-206ENST00000358278 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 FAM156AQ8NDB6 213 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 MCUR1Q96AQ8 359 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 ZNF607Q96SK3 696 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 THTPAQ9BU02 230 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 GALNT9Q9HCQ5 603 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 BCL2L10Q9HD36 194 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 CNOT11Q9UKZ1 510 aaKnown RBP13.97□□□□□ -0.17
TPM1-206ENST00000358278 B3GNT3Q9Y2A9 372 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 DSPPQ9NZW4 1301 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 SVILO95425 2214 aa13.97□□□□□ -0.17
TPM1-206ENST00000358278 NPIPB9F8W1W9 429 aa13.96□□□□□ -0.17
TPM1-206ENST00000358278 NME2P1O60361 137 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms