RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 GNA13Q14344 377 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 SFRP4Q6FHJ7 346 aaPredicted RBP12.5□□□□□ -0.41
NCDN-201ENST00000356090 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 CHMP1BQ7LBR1 199 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
NCDN-201ENST00000356090 CACNG6Q9BXT2 260 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 ADAP2Q9NPF8 381 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 BRD7Q9NPI1 651 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 RGS9O75916 674 aaPredicted RBP12.5□□□□□ -0.41
NCDN-201ENST00000356090 MT-ND4P03905 459 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 CSNK2A2P19784 350 aaPredicted RBP12.5□□□□□ -0.41
NCDN-201ENST00000356090 LYPD4Q6UWN0 246 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 KLHDC8AQ8IYD2 350 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 GRHL3Q8TE85 626 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 OR8D1Q8WZ84 308 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 KIAA1143Q96AT1 154 aaPredicted RBP12.5□□□□□ -0.41
NCDN-201ENST00000356090 ARRDC3Q96B67 414 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 OR7D2Q96RA2 312 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 DPAGT1Q9H3H5 408 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 ZNF780BQ9Y6R6 833 aa12.5□□□□□ -0.41
NCDN-201ENST00000356090 A8MUA0 341 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PRR23D1E9PI22 279 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 RFPL3O75679 317 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 RPN2P04844 631 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PRR23D2P0DMB1 279 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 LAG3P18627 525 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 ZNF793Q6ZN11 406 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 RD3Q7Z3Z2 195 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 LINC00471Q8N535 108 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 ZNF655Q8N720 491 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 GCDHQ92947 438 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 MED30Q96HR3 178 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SAGE1Q9NXZ1 904 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CACNG2Q9Y698 323 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 F5P12259 2224 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 TSPAN4O14817 238 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SLC19A2O60779 497 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 RHOP08100 348 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 ANXA3P12429 323 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PEPDP12955 493 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SNRPBP14678 240 aaKnown RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 NDUFV2P19404 249 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PITPNBP48739 271 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 PCBP4P57723 403 aaKnown RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 ZNF322Q6U7Q0 402 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 PRSS45Q7RTY3 260 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CEP76Q8TAP6 659 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SLC41A3Q96GZ6 507 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 ZNF514Q96K75 400 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 ZSWIM3Q96MP5 696 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 MCOLN1Q9GZU1 580 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 NARFLQ9H6Q4 476 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 ATP13A2Q9NQ11 1180 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CDH10Q9Y6N8 788 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 TBC1D3BA6NDS4 549 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 RNF13O43567 381 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 EPPINO95925 133 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 BTN3A2P78410 334 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 DUSP2Q05923 314 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CREB3L2Q70SY1 520 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 ACOT4Q8N9L9 421 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 CNRIP1Q96F85 164 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 MED18Q9BUE0 208 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SLC7A5P2Q9GIP4 190 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 TRIM36Q9NQ86 728 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
NCDN-201ENST00000356090 SIRT4Q9Y6E7 314 aaPredicted RBP12.49□□□□□ -0.41
NCDN-201ENST00000356090 HEATR5BQ9P2D3 2071 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 SLC9B1P1A6NJY1 282 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 TEX46H3BTG2 121 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 HRGP04196 525 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 ADRB3P13945 408 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 CXCL3P19876 107 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 MPIP34949 423 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 VIPR2P41587 438 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
NCDN-201ENST00000356090 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 MRGPRX3Q96LB0 322 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 GTPBP2Q9BX10 602 aaKnown RBP12.48□□□□□ -0.41
NCDN-201ENST00000356090 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 MRPS30Q9NP92 439 aaKnown RBP12.48□□□□□ -0.41
NCDN-201ENST00000356090 WDR45Q9Y484 360 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 ALPK3Q96L96 1907 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 A0A1W2PR48 441 aa12.48□□□□□ -0.41
NCDN-201ENST00000356090 IGLON5A6NGN9 336 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms