RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TMEM255AQ5JRV8 349 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 UBE2Q1Q7Z7E8 422 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 OR52N1Q8NH53 320 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 RFKQ969G6 155 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 DPYSL5Q9BPU6 564 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.69■□□□□ 0.42
PRPF39-201ENST00000355765 MED20Q9H944 212 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 COPZ2Q9P299 210 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 GPR160Q9UJ42 338 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 A0A0G2JK05 382 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 ANXA2P2A6NMY6 339 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 SYN3O14994 580 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 PEX14O75381 377 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 NFATC1O95644 943 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 GAAP10253 952 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 SPINT3P49223 89 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 CTSCP53634 463 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 EIF2B5Q13144 721 aaKnown RBP17.69■□□□□ 0.42
PRPF39-201ENST00000355765 OR13C5Q8NGS8 318 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF480Q8WV37 535 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 NPAS1Q99742 590 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 B4GALT6Q9UBX8 382 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 LIPT1Q9Y234 373 aa17.69■□□□□ 0.42
PRPF39-201ENST00000355765 TUBAL3A6NHL2 446 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 SLCO2B1O94956 709 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 GSTM3P21266 225 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 CTSOP43234 321 aaPredicted RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 GPR4P46093 362 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 STXBP1P61764 594 aaKnown RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 ZNF169Q14929 603 aaPredicted RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 FAM110CQ1W6H9 321 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 OR5M10Q6IEU7 315 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 SLC25A25Q6KCM7 469 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 TMEM99Q8N816 258 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 CPSF4LA6NMK7 179 aaKnown RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 PRR23D1E9PI22 279 aaPredicted RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 NPC1O15118 1278 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 SIX6O95475 246 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 PRR23D2P0DMB1 279 aaPredicted RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 UGT2B7P16662 529 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 NPPBP16860 134 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 CBX5P45973 191 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 SMAD3P84022 425 aaKnown RBP17.68■□□□□ 0.42
PRPF39-201ENST00000355765 MELKQ14680 651 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 CPOQ8IVL8 374 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 ALG8Q9BVK2 526 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 FAIM2Q9BWQ8 316 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 ZDHHC6Q9H6R6 413 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 WDR26Q9H7D7 661 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 HPF1Q9NWY4 346 aa17.68■□□□□ 0.42
PRPF39-201ENST00000355765 PLSCR5A0PG75 271 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 SURF4O15260 269 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 IGHA1P01876 353 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 ACVR1BP36896 505 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 MAP2K5Q13163 448 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 RPTNQ6XPR3 784 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 IKBIPQ70UQ0 350 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 TAS1R1Q7RTX1 841 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 RASGRP3Q8IV61 690 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 BVESQ8NE79 360 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 OR11G2Q8NGC1 345 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 SMAP2Q8WU79 429 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 USB1Q9BQ65 265 aaKnown RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 DPH7Q9BTV6 452 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 ZCCHC4Q9H5U6 513 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 HINT3Q9NQE9 182 aaKnown RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 H2AFY2Q9P0M6 372 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 PIPOXQ9P0Z9 390 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 FAM74A7A6NL05 159 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 LRRN3E7EW58 273 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 ARPC1BO15143 372 aaKnown RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 KCNJ13O60928 360 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 AHRP35869 848 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 RAD52P43351 418 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 PRKAG1P54619 331 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 TAS2R41P59536 307 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 ACSM1Q08AH1 577 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 HTR4Q13639 388 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 FAM74A3Q4VXF1 159 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 PIP5KL1Q5T9C9 394 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 NHLRC1Q6VVB1 395 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 KRT78Q8N1N4 520 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 CPXM2Q8N436 756 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 PRRC1Q96M27 445 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 LRRN3Q9H3W5 708 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 SCPEP1Q9HB40 452 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 SIRT3Q9NTG7 399 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 TEX10Q9NXF1 929 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 BABAM2Q9NXR7 383 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 ING1Q9UK53 422 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 RCE1Q9Y256 329 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 DYRK1BQ9Y463 629 aa17.67■□□□□ 0.42
PRPF39-201ENST00000355765 TP53BP1Q12888 1972 aaPredicted RBP17.67■□□□□ 0.42
PRPF39-201ENST00000355765 PGRMC2O15173 223 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 GDNFP39905 211 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 PLD1Q13393 1074 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 KLF9Q13886 244 aaPredicted RBP17.66■□□□□ 0.42
PRPF39-201ENST00000355765 ANKRD53Q8N9V6 530 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 GANCQ8TET4 914 aa17.66■□□□□ 0.42
PRPF39-201ENST00000355765 SMPDL3AQ92484 453 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms