RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RPS21P63220 83 aaKnown RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 DMPKQ09013 629 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 KLHL12Q53G59 568 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 TRMT12Q53H54 448 aaKnown RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 VN1R4Q7Z5H5 301 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 GIMAP5Q96F15 307 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 RAB11FIP5Q9BXF6 653 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 HINT3Q9NQE9 182 aaKnown RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 LIPT1Q9Y234 373 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 CLCA3PQ9Y6N3 262 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 STK25O00506 426 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 APODP05090 189 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 PAMR1Q6UXH9 720 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 FRRS1Q6ZNA5 592 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 MFSD9Q8NBP5 474 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 OSTF1Q92882 214 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 ENKD1Q9H0I2 346 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 GRIP1Q9Y3R0 1128 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 MUC22E2RYF6 1773 aaPredicted RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 A0A1B0GVC2 190 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 A6NIN4 97 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 KDM4EB2RXH2 506 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 PLA2G10O15496 165 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 KIR2DL3P43628 341 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 DUSP5Q16690 384 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 Q8N402 240 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 SIRT6Q8N6T7 355 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 SRFBP1Q8NEF9 429 aaKnown RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 TSACCQ96A04 125 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ATP13A2Q9NQ11 1180 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 FBXO34Q9NWN3 711 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF443Q9Y2A4 671 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 GSAPA4D1B5 854 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 GABRPO00591 440 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 LDB3O75112 727 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 SLC2A2P11168 524 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 PSKH1P11801 424 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 MYL9P24844 172 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 PGGHGQ32M88 737 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 TRIQKQ629K1 86 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ENPP7Q6UWV6 458 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 RFKQ969G6 155 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 MOAP1Q96BY2 351 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 TNFRSF10DQ9UBN6 386 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 B4DXG7 233 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 SYT5O00445 386 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF155Q12901 538 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 MFSD12Q6NUT3 480 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF836Q6ZNA1 936 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 LRRC25Q8N386 305 aaPredicted RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 KLHL36Q8N4N3 616 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 C19orf18Q8NEA5 215 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 AP3S1Q92572 193 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 TEX12Q9BXU0 123 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 CACYBPQ9HB71 228 aaKnown RBP18.25■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF232Q9UNY5 417 aa18.25■□□□□ 0.51
COL13A1-201ENST00000354547 LRRC72A6NJI9 287 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 REM1O75628 298 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 RAB25P57735 213 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 RPS7P62081 194 aaKnown RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PPP2CBP62714 309 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PPP2CAP67775 309 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ABATP80404 500 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 MAPK14Q16539 360 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 AADACL4Q5VUY2 407 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PEX5LQ8IYB4 626 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PFN4Q8NHR9 129 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 DEPDC7Q96QD5 511 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 SRMSQ9H3Y6 488 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PAQR5Q9NXK6 330 aaPredicted RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 CALML5Q9NZT1 146 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 PTGFRNQ9P2B2 879 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 SLC17A4Q9Y2C5 497 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 C2orf16Q68DN1 1984 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 FAM25AB3EWG3 89 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 FAM25CB3EWG5 89 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 FAM25GB3EWG6 89 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ADH1BP00325 375 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 MRPL3P09001 348 aaKnown RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ERVK-21P61565 698 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 DSG2Q14126 1118 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF620Q6ZNG0 422 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 CXXC5Q7LFL8 322 aaKnown RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 ZNF614Q8N883 585 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 OR2T33Q8NG76 320 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 C1QTNF2Q9BXJ5 285 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 TRIM45Q9H8W5 580 aaPredicted RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 MRPS18AQ9NVS2 196 aaKnown RBP18.24■□□□□ 0.51
COL13A1-201ENST00000354547 CBLCQ9ULV8 474 aa18.24■□□□□ 0.51
COL13A1-201ENST00000354547 A0A0B4J293 547 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 P2RX6O15547 441 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 CTBP2P56545 445 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 ASAH1Q13510 395 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 FIGNL1Q6PIW4 674 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 GDPD1Q8N9F7 314 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 CHAC2Q8WUX2 184 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 TP53INP1Q96A56 240 aa18.23■□□□□ 0.51
COL13A1-201ENST00000354547 RNF31Q96EP0 1072 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms