RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 EPPINO95925 133 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 AGR2O95994 175 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 NGFRP08138 427 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GLI4P10075 376 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 IDO1P14902 403 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 HK1P19367 917 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 CHMP24386 653 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 MSX1P28360 303 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 EPHA3P29320 983 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 MAP3K8P41279 467 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 ANXA11P50995 505 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 HBA1P69905 142 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 OCRLQ01968 901 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 ATAD3BQ5T9A4 648 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 RAET1LQ5VY80 246 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 ZNF787Q6DD87 383 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 MARCH3Q86UD3 253 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GLB1L3Q8NCI6 653 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GOT1L1Q8NHS2 421 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 DUSP19Q8WTR2 217 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 RNF138Q8WVD3 245 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 MARVELD3Q96A59 401 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GIMAP5Q96F15 307 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 C16orf58Q96GQ5 468 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 EXD2Q9NVH0 621 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 AIG1Q9NVV5 245 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 FBXL2Q9UKC9 423 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 FAM215AQ9Y5M1 114 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 RNF103-CHMP3A0A140T963 221 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 FAM90A27PA6NNH2 459 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 ALG1L2C9J202 215 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 DVL2O14641 736 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 CPSF4O95639 269 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 AK1P00568 194 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 CPN1P15169 458 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 TBXA2RP21731 343 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 UQCRC2P22695 453 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 CHI3L1P36222 383 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 EEFSECP57772 596 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 SRYQ05066 204 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 GSTA3Q16772 222 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 GRAMD1BQ3KR37 738 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 ACSF3Q4G176 576 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 CCDC71Q8IV32 467 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 RPRMLQ8N4K4 120 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 OR2M3Q8NG83 312 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 OR5AK3PQ8NH89 298 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 CDS1Q92903 461 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC35G5Q96KT7 338 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 TRIB1Q96RU8 372 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 PIGQQ9BRB3 760 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 WDR55Q9H6Y2 383 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC24A3Q9HC58 644 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 INTS9Q9NV88 658 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 MED11Q9P086 117 aa14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 RPH3AQ9Y2J0 694 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 NCOA6Q14686 2063 aaPredicted RBP14.33□□□□□ -0.12
TSPAN4-201ENST00000346501 FREM3P0C091 2139 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 DIAPH2O60879 1101 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 OXSR1O95747 527 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 PEPDP12955 493 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 MATN1P21941 496 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 TIMP3P35625 211 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 ZNF41P51814 821 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 GAS1P54826 345 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 NME5P56597 212 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 STX1BP61266 288 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC25A35Q3KQZ1 300 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 FAM174BQ3ZCQ3 159 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 GLYR1Q49A26 553 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 DCST2Q5T1A1 773 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 NSUN5P2Q63ZY6 315 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 RTL6Q6ICC9 239 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 C16orf62Q7Z3J2 963 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 C6orf120Q7Z4R8 191 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 GALNT10Q86SR1 603 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 CLECL1Q8IZS7 167 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 MEIOBQ8N635 442 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 FADS6Q8N9I5 356 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 FAM110BQ8TC76 370 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 ZPLD1Q8TCW7 415 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 ACTRT2Q8TDY3 377 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 OTUB1Q96FW1 271 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 WDYHV1Q96HA8 205 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 C7orf26Q96N11 449 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 CALHM2Q9HA72 323 aa14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 PHF3Q92576 2039 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-201ENST00000346501 COL12A1Q99715 3063 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 A0A087WZY1 265 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 A0A1W2PQD3 144 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 CD8B2A6NJW9 211 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 GTPBP1O00178 669 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 UBDO15205 165 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 POLR3GO15318 223 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 SLC22A3O75751 556 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 IGKV1D-16P01601 117 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 IL6P05231 212 aa14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 POU3F2P20265 443 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-201ENST00000346501 TCEA1P23193 301 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms