RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 DNAJC27Q9NZQ0 273 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 A6NIZ1 184 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 SULT2B1O00204 365 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 RAP1BP61224 184 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 RAP1AP62834 184 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 ARFRP1Q13795 201 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 PRAMEF8Q5VWM4 474 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 PRAMEF7Q5VXH5 474 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 JAGN1Q8N5M9 183 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM178AQ8NBL3 297 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TTYH2Q9BSA4 534 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC7A11Q9UPY5 501 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 POLHQ9Y253 713 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 JRKO75564 520 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 KDM4BO94953 1096 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 ADAP00813 363 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 OR3A3P47888 321 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 OR3A2P47893 321 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 CSNK1G2P78368 415 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 SBSNQ6UWP8 590 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 MARCH9Q86YJ5 346 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 MISPQ8IVT2 679 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 SORT1Q99523 831 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TRIM8Q9BZR9 551 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 MARCH7Q9H992 704 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 EMC3Q9P0I2 261 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 DHFRP00374 187 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 DAP3P51398 398 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 NUDT6P53370 316 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 CRISP1P54107 249 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 OR8J1Q8NGP2 316 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 MAL2Q969L2 176 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 LSM1O15116 133 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 CEACAM5P06731 702 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 CAPN3P20807 821 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 LAPTM4AQ15012 233 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM215Q68D42 235 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 LCN8Q6JVE9 175 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 PRICKLE2Q7Z3G6 844 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 CLMPQ9H6B4 373 aa15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 SRA1Q9HD15 236 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-201ENST00000344626 TSC22D2O75157 780 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 SELENOWP63302 87 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 CCSMST1Q4G0I0 132 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 KMT5CQ86Y97 462 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 RNF175Q8N4F7 328 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 NAXEQ8NCW5 288 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 OR51G2Q8NGK0 314 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 ITPAQ9BY32 194 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 SNPHO15079 494 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 NME1P15531 152 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 ST6GAL1P15907 406 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 CD36P16671 472 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 BCAP31P51572 246 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 FBXO42Q6P3S6 717 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC30A3Q99726 388 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 IGHV3-20A0A0C4DH32 117 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 SAGE2PA6NJ88 616 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 H0YAE9 185 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 K7EQS6 105 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 CTNSO60931 367 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 VNN2O95498 520 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 C7P10643 843 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 ZXDBP98169 803 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 GPALPP1Q8IXQ4 340 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 LRRC17Q8N6Y2 441 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 CAPSLQ8WWF8 208 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 OR7D2Q96RA2 312 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 RXFP3Q9NSD7 469 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 GPX3P22352 226 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 HES3Q5TGS1 186 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 CLEC14AQ86T13 490 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF227Q86WZ6 799 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 OR7G1Q8NGA0 311 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 NXPE2Q96DL1 559 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 PGAM5Q96HS1 289 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 TEX101Q9BY14 249 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 SNTG1Q9NSN8 517 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 GPR45Q9Y5Y3 372 aa15.38■□□□□ 0.05
SMARCA4-201ENST00000344626 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ADAM8P78325 824 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 RNASE12Q5GAN4 147 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 RPS26P11Q5JNZ5 115 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ZNF627Q7L945 461 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 GRAMD2AQ8IUY3 354 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 LIN28AQ9H9Z2 209 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TAS2R10Q9NYW0 307 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 PLOD3O60568 738 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ALOX12BO75342 701 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 NDUFB2O95178 105 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ETS2P15036 469 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 GGT2P36268 569 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 GPR4P46093 362 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 CTXN1P60606 82 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TGFBR3Q03167 851 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TRAM1Q15629 374 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 FCRLBQ6BAA4 426 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM71Q6P5X7 295 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 CYP4V2Q6ZWL3 525 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms