RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ZFP3Q96NJ6 502 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 CMSS1Q9BQ75 279 aaKnown RBP17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ENKD1Q9H0I2 346 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 CA10Q9NS85 328 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 ZFP57Q9NU63 452 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.37
SMPD1-201ENST00000342245 SELLP14151 372 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 TYRP1P17643 537 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CR2P20023 1033 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CNR1P21554 472 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 AOAHP28039 575 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 VIPR1P32241 457 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 GDNFP39905 211 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CD79BP40259 229 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 RAB5BP61020 215 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 MAT1AQ00266 395 aaKnown RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 TNFRSF17Q02223 184 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 MLLT1Q03111 559 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF322Q6U7Q0 402 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF852Q6ZMS4 543 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 OR51Q1Q8NH59 317 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 LKAAEAR1Q8TD35 194 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 IL17CQ9P0M4 197 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 POLR2AP24928 1970 aaKnown RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 C5orf58C9J3I9 102 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 H3BRB1 525 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 PTGESO14684 152 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 MGMTP16455 207 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 PTAFRP25105 342 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CDH11P55287 796 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 RNF212Q495C1 297 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 ARSIQ5FYB1 569 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 HORMAD2Q8N7B1 307 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CRB3Q9BUF7 120 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 PAPOLGQ9BWT3 736 aaKnown RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 TEX12Q9BXU0 123 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 OR10A4Q9H209 315 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 MAGEH1Q9H213 219 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CACYBPQ9HB71 228 aaKnown RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 BARX1Q9HBU1 254 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-201ENST00000342245 CPA4Q9UI42 421 aa17.38■□□□□ 0.37
SMPD1-201ENST00000342245 TP53BP1Q12888 1972 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 A0A1W2PQH9 124 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 A0A1W2PRQ8 180 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 C8GP07360 202 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 FBP1P09467 338 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 MPGP29372 298 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 INSL4Q14641 139 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 OR14A16Q8NHC5 309 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 SMAP2Q8WU79 429 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 TOX2Q96NM4 488 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 C19orf43Q9BQ61 176 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 SEBOXQ9HB31 216 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 HRASLSQ9HDD0 168 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 MIOXQ9UGB7 285 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 OPN4Q9UHM6 478 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 SLC22A7Q9Y694 548 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 A0A1B0GVC2 190 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 UBE2QL1A1L167 161 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 A6NIN4 97 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 EFCAB7A8K855 629 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 STX11O75558 287 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 SLC25A27O95847 323 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 FOLR2P14207 255 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 MST1P26927 711 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 CTSCP53634 463 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 CHIT1Q13231 466 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 DDX39BQ13838 428 aaKnown RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 GUCA2BQ16661 112 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 TMEM255AQ5JRV8 349 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 CXorf57Q6NSI4 855 aaKnown RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 PUSL1Q8N0Z8 303 aaKnown RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 HDDC3Q8N4P3 179 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 RBM14Q96PK6 669 aaKnown RBP17.37■□□□□ 0.37
SMPD1-201ENST00000342245 C16orf70Q9BSU1 422 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 GSDMCQ9BYG8 508 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 SLC38A1Q9H2H9 487 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 REEP4Q9H6H4 257 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 MAP4K5Q9Y4K4 846 aa17.37■□□□□ 0.37
SMPD1-201ENST00000342245 TMEM218A2RU14 115 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 TNFRSF10BO14763 440 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ARPC1BO15143 372 aaKnown RBP17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF749O43361 778 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 GPR37L1O60883 481 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ATP13A5Q4VNC0 1218 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 C1orf94Q6P1W5 598 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 MON1AQ86VX9 555 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 KLBQ86Z14 1044 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 SLC7A13Q8TCU3 470 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 ZNF354BQ96LW1 612 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 SLC12A9Q9BXP2 914 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 NOX3Q9HBY0 568 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 SLC22A11Q9NSA0 550 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 FLVCR2Q9UPI3 526 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 BACE2Q9Y5Z0 518 aa17.36■□□□□ 0.37
SMPD1-201ENST00000342245 TDRD15B5MCY1 1934 aaKnown RBP17.36■□□□□ 0.37
SMPD1-201ENST00000342245 FXYD6-FXYD2A0A087WZ82 144 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms