RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 Q6ZPB1 254 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZCCHC23Q6ZST2 131 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ACAD11Q709F0 780 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 BIVMQ86UB2 503 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 GRAMD2AQ8IUY3 354 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 C9orf40Q8IXQ3 194 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 Q8N1Y9 231 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FADS6Q8N9I5 356 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PAQR8Q8TEZ7 354 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ESAMQ96AP7 390 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ELP4Q96EB1 424 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ARSGQ96EG1 525 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MMABQ96EY8 250 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZBED6CLQ96FA7 236 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 NEIL1Q96FI4 390 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 CLPTM1LQ96KA5 538 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF354BQ96LW1 612 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MS4A4EQ96PG1 132 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MTERF1Q99551 399 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ADI1Q9BV57 179 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ACAT2Q9BWD1 397 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 BTBD2Q9BX70 525 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MRPL1Q9BYD6 325 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 OR10A4Q9H209 315 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 RAD21L1Q9H4I0 556 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 COPS7BQ9H9Q2 264 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 TCF7L2Q9NQB0 619 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 DHCR7Q9UBM7 475 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PRODH2Q9UF12 536 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 C3orf18Q9UK00 162 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FBXL4Q9UKA2 621 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 CNOT11Q9UKZ1 510 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PSME2Q9UL46 239 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SLC12A4Q9UP95 1085 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SNX8Q9Y5X2 465 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 COPG1Q9Y678 874 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ANKRD17O75179 2603 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FAM149AA5PLN7 773 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 OR6C70A6NIJ9 312 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SMIM23A6NLE4 172 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 E9PBE3 544 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FCHO1O14526 889 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 EMC8O43402 210 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 NME2P1O60361 137 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 HNRNPCL1O60812 293 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 B4GALT2O60909 372 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 DEAF1O75398 565 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 KLK1P06870 262 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 HEXBP07686 556 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 GPX2P18283 190 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 TCN2P20062 427 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 TACR1P25103 407 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PTGDSP41222 190 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ARFIP2P53365 341 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MRPS22P82650 360 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FOLH1Q04609 750 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 DUSP2Q05923 314 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 FADDQ13158 208 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MAPRE2Q15555 327 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MAPK11Q15759 364 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF239Q16600 458 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ARHGAP11BQ3KRB8 267 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 C18orf63Q68DL7 685 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SHISA2Q6UWI4 295 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 DLEU7Q6UYE1 221 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 RPS27LQ71UM5 84 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SERPINA11Q86U17 422 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 TGIF2LYQ8IUE0 185 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PLD3Q8IV08 490 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MISPQ8IVT2 679 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SIAH3Q8IW03 269 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 LIX1Q8N485 282 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF808Q8N4W9 903 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 CCNYL1Q8N7R7 359 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 OR5T3Q8NGG3 340 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 OR5L2Q8NGL0 311 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 LILRB1Q8NHL6 650 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 C16orf52Q8NHV5 167 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SPPL2AQ8TCT8 520 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 SLC2A12Q8TD20 617 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZFP90Q8TF47 636 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 GTF2H4Q92759 462 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MR1Q95460 341 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 NCLNQ969V3 563 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 RNF125Q96EQ8 232 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 DTNBP1Q96EV8 351 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 BOD1Q96IK1 185 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 OR52B2Q96RD2 323 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 PRPF18Q99633 342 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 CPPED1Q9BRF8 314 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ANGPTL4Q9BY76 406 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 WWTR1Q9GZV5 400 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 NSRP1Q9H0G5 558 aaKnown RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 MUC13Q9H3R2 512 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 GLIPR2Q9H4G4 154 aa3.21□□□□□ -1.9
CCDC66-202ENST00000341455 ZNF552Q9H707 407 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 AKIRIN1Q9H9L7 192 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-202ENST00000341455 C12orf10Q9HB07 376 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms