RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RBBP4Q09028 425 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 C17orf67Q0P5P2 114 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 C19orf57Q0VDD7 668 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 SYPL1Q16563 259 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF630Q2M218 657 aaPredicted RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 BICRALQ6AI39 1079 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TIGD3Q6B0B8 471 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ARPINQ7Z6K5 226 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZAR1Q86SH2 424 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 MARCH3Q86UD3 253 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC22A16Q86VW1 577 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 MISPQ8IVT2 679 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF619Q8N2I2 560 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF843Q8N446 348 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ANKFN1Q8N957 763 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 OR1J4Q8NGS1 313 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 DUSP19Q8WTR2 217 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC38A5Q8WUX1 472 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 SNRNP40Q96DI7 357 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF597Q96LX8 424 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TAAR6Q96RI8 345 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF350Q9GZX5 532 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TMEM38AQ9H6F2 299 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 A4GALTQ9NPC4 353 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ARL8BQ9NVJ2 186 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 B4GALT7Q9UBV7 327 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ZFHX4Q86UP3 3567 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 A0A1W2PQD3 144 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PRAMEF27A3QJZ7 478 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ALG1L2C9J202 215 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 GNB5O14775 395 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SNPHO15079 494 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SCO2O43819 266 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CBR3O75828 277 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ANGPTL1O95841 491 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PRB1P04280 392 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF24P17028 368 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC6A2P23975 617 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PTGDSP41222 190 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 MLLT10P55197 1068 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 MTPNP58546 118 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 MXRA7P84157 204 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CDK6Q00534 326 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 FOXO1Q12778 655 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC10A1Q14973 349 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF141Q15928 474 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CYP51A1Q16850 503 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 HYAL4Q2M3T9 481 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 KLHL26Q53HC5 615 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 KRTCAP3Q53RY4 240 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 TYW3Q6IPR3 259 aaKnown RBP10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 BNC2Q6ZN30 1099 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 TRPM8Q7Z2W7 1104 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SERPINA11Q86U17 422 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PLCZ1Q86YW0 608 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PEX5LQ8IYB4 626 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 C11orf65Q8NCR3 313 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 OR10A6Q8NH74 314 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CPT1CQ8TCG5 803 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 RNF138Q8WVD3 245 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 FAR1Q8WVX9 515 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 NTNG2Q96CW9 530 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 FRMD6Q96NE9 622 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC39A3Q9BRY0 314 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SPATA9Q9BWV2 254 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 IKZF5Q9H5V7 419 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 KAT8Q9H7Z6 458 aaKnown RBP10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 GALNT9Q9HCQ5 603 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 OLAHQ9NV23 265 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 NDE1Q9NXR1 346 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 FLRT3Q9NZU0 649 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 PPP4R1LQ9P1A2 415 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 SUCOQ9UBS9 1254 aaKnown RBP10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 WIF1Q9Y5W5 379 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CNTRLQ7Z7A1 2325 aa10.89□□□□□ -0.67
SPTLC1-202ENST00000337841 CFAP47Q6ZTR5 3102 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPA5A0A0B4J1W7 369 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 A0A0G2JMM0 328 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 A0A1W2PPB8 328 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 A0A1W2PRS3 328 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 PINLYPA6NC86 204 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 SERINC4A6NH21 518 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 KIR3DP1A8MWS1 328 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPA7E9PJI5 369 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPA5E9PKD4 350 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 NPIPB9F8W1W9 429 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 FXYD1O00168 92 aa10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 TFECO14948 347 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 GLSO94925 669 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-202ENST00000337841 BCHEP06276 602 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms