RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 C10orf90Q96M02 699 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 SECISBP2Q96T21 854 aaKnown RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 HCAR1Q9BXC0 346 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 COLEC10Q9Y6Z7 277 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 A0A1W2PQF6 199 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 FABP12A6NFH5 140 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 TTC36A6NLP5 189 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 CASKO14936 926 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 REM1O75628 298 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 CELA2BP08218 269 aaPredicted RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 GSTT2P0CG29 244 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 GSTT2BP0CG30 244 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 NT5EP21589 574 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 TSPAN31Q12999 210 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 FGF11Q92914 225 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 NKX2-4Q9H2Z4 354 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 TRIM45Q9H8W5 580 aaPredicted RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 DDX28Q9NUL7 540 aaKnown RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 KLHL28Q9NXS3 571 aa13.85□□□□□ -0.19
UBA1-201ENST00000335972 ZNF443Q9Y2A4 671 aaPredicted RBP13.85□□□□□ -0.19
UBA1-201ENST00000335972 APEX1P27695 318 aaKnown RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 LSSP48449 732 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 ANXA11P50995 505 aaKnown RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 ZAR1Q86SH2 424 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SPRYD4Q8WW59 207 aaPredicted RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 KATNB1Q9BVA0 655 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 RAB11FIP5Q9BXF6 653 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 PITHD1Q9GZP4 211 aaPredicted RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 UGT2A1Q9Y4X1 527 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 CDC123O75794 336 aaPredicted RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 NTSR1P30989 418 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 GCGRP47871 477 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SHC2P98077 582 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 RGS1Q08116 209 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 GPR18Q14330 331 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 NNATQ16517 81 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 TRIM48Q8IWZ4 208 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 OR4K14Q8NGD5 310 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SFXN5Q8TD22 340 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 RNF31Q96EP0 1072 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 CASC3O15234 703 aaKnown RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 SLC35G6P0C7Q6 338 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 ACADMP11310 421 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 UGT2B7P16662 529 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 CPEP16870 476 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 TYRP1P17643 537 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 ABATP80404 500 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 EFNB1P98172 346 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 KLHL22Q53GT1 634 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SIRT6Q8N6T7 355 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 UFD1Q92890 307 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SLC25A46Q96AG3 418 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 ITPKCQ96DU7 683 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 KCTD7Q96MP8 289 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 SRRQ9GZT4 340 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 MAT2BQ9NZL9 334 aa13.84□□□□□ -0.19
UBA1-201ENST00000335972 USP36Q9P275 1121 aaKnown RBP13.84□□□□□ -0.19
UBA1-201ENST00000335972 GXYLT2A0PJZ3 443 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 FGF17O60258 216 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 GYPBP06028 91 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 LAMP2P13473 410 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 SDHBP21912 280 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 SLC1A3P43003 542 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 C1orf61Q13536 156 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 GNA13Q14344 377 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 OR51A7Q8NH64 312 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 TXNDC15Q96J42 360 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 BMFQ96LC9 184 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.19
UBA1-201ENST00000335972 PRRG3Q9BZD7 231 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 OR51V1Q9H2C8 321 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 KCNE5Q9UJ90 142 aa13.83□□□□□ -0.19
UBA1-201ENST00000335972 A0A075B6Q4 140 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 MAGEB4O15481 346 aaPredicted RBP13.83□□□□□ -0.2
UBA1-201ENST00000335972 HPGDSO60760 199 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 CLUP10909 449 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 GSTM3P21266 225 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 RPS7P62081 194 aaKnown RBP13.83□□□□□ -0.2
UBA1-201ENST00000335972 NDUFA9Q16795 377 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 IL20RBQ6UXL0 311 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 ATP6V1C2Q8NEY4 427 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 KCMF1Q9P0J7 381 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 FBXL4Q9UKA2 621 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 DENND4AQ7Z401 1863 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 SLC30A4O14863 429 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 CT62P0C5K7 136 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 MAKP20794 623 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 HTR2AP28223 471 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 P2RY14Q15391 338 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
UBA1-201ENST00000335972 FAM27D1Q5T7N8 215 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 SDE2Q6IQ49 451 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 FIGLAQ6QHK4 219 aa13.83□□□□□ -0.2
UBA1-201ENST00000335972 SRFBP1Q8NEF9 429 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms