RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RNF13O43567 381 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 FKTNO75072 461 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 YIF1AO95070 293 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SAT1P21673 171 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 BTCP35070 178 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 PXNP49023 591 aaPredicted RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 YBX1P67809 324 aaKnown RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 HMGN3Q15651 99 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 KLHL24Q6TFL4 600 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 PQLC3Q8N755 202 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 POGLUT1Q8NBL1 392 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 ASB13Q8WXK3 278 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 UBL7Q96S82 380 aaPredicted RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 SNHG12Q9BXW3 62 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 UBQLN3Q9H347 655 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 FKRPQ9H9S5 495 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SLC25A19Q9HC21 320 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 SERHLQ9NQF3 203 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 NPDC1Q9NQX5 325 aaPredicted RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 RNF19AQ9NV58 838 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 MS4A12Q9NXJ0 267 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 FBXL4Q9UKA2 621 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SAMD4AQ9UPU9 718 aaKnown RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 MAST2Q6P0Q8 1798 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 A0A1B0GUH1 482 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 CBY3A6NI87 242 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 IQCF5A8MTL0 148 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 MDM4O15151 490 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SIAH2O43255 324 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 VIPP01282 170 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 IFNA6P05013 189 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 PSAPP07602 524 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SPATA31C1P0DKV0 1188 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 TMIGD3P0DMS9 266 aaPredicted RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 RAB8AP61006 207 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 ALKAL1Q6UXT8 129 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 OR9Q2Q8NGE9 314 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 ARNTL2Q8WYA1 636 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 MRPS31Q92665 395 aaKnown RBP8.1□□□□□ -1.11
TDP1-201ENST00000335725 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 OMDQ99983 421 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 PLA2G12BQ9BX93 195 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 ADAM19Q9H013 955 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 UQCC1Q9NVA1 299 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 CITO14578 2027 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 KANTRA0A1W2PQU2 76 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 C9JVG2 144 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 UBFD1O14562 309 aaKnown RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 OR7A17O14581 309 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 EDIL3O43854 480 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 SH3BGRLO75368 114 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 PRAMEF12O95522 483 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 C8GP07360 202 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 MAPTP10636 758 aaKnown RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 ARSAP15289 507 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 MPGP29372 298 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 VIPR1P32241 457 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 JAK3P52333 1124 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 RAB10P61026 200 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 CRADDP78560 199 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 PRKCZQ05513 592 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 MESTQ5EB52 335 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 C22orf42Q6IC83 251 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 JMJD6Q6NYC1 403 aaPredicted RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 FAHD1Q6P587 224 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 TMEM91Q6ZNR0 172 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 DPPA4Q7L190 304 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 TM4SF18Q96CE8 201 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 ZNF583Q96ND8 569 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 OR2M4Q96R27 311 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 CLCC1Q96S66 551 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 FUZQ9BT04 418 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 ZNF426Q9BUY5 554 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 ASF1BQ9NVP2 202 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 PIPOXQ9P0Z9 390 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 E9PQ18 207 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 PHOX2AO14813 284 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 TPST2O60704 377 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 ACPPP15309 386 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 GABRR2P28476 465 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 AGTR1P30556 359 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 SOX3P41225 446 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 AVPR1BP47901 424 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 LIMS1P48059 325 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 IDH2P48735 452 aaKnown RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 MTPNP58546 118 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 PPIAP62937 165 aaKnown RBP8.09□□□□□ -1.11
TDP1-201ENST00000335725 DUOXA1Q1HG43 343 aa8.09□□□□□ -1.11
TDP1-201ENST00000335725 NKAIN2Q5VXU1 208 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms