RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CT45A8P0DMV1 189 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CT45A9P0DMV2 189 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CPN1P15169 458 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ENDOUP21128 410 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 GDF1P27539 372 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PTPN6P29350 595 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FEN1P39748 380 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 RFC3P40938 356 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PTGDSP41222 190 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 SLCO1A2P46721 670 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PSMD4P55036 377 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 FOXA1P55317 472 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FBXW4P57775 412 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 C21orf58P58505 322 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LINC00310P59036 64 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 HMGCS1Q01581 520 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 OCRLQ01968 901 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 DUSP2Q05923 314 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 TFF3Q07654 80 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CRYZQ08257 329 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 IFFO1Q0D2I5 559 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PLCXD2Q0VAA5 305 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 GANABQ14697 944 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 HSPB2Q16082 182 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FBXL19-AS1Q494R0 122 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 TRMT12Q53H54 448 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 CT45A2Q5DJT8 189 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 XKR7Q5GH72 579 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 SPDYAQ5MJ70 313 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 C1orf185Q5T7R7 199 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PRAMEF20Q5VT98 475 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FOXB2Q5VYV0 432 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 VASNQ6EMK4 673 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 NOXRED1Q6NXP6 359 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ZCCHC12Q6PEW1 402 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FAM111BQ6SJ93 734 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 R3HCC1LQ7Z5L2 792 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 LACC1Q8IV20 430 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 C10orf107Q8IVU9 208 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CLYBLQ8N0X4 340 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LIX1Q8N485 282 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 MARVELD2Q8N4S9 558 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CCDC63Q8NA47 563 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 OR1J4Q8NGS1 313 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 SDCCAG3Q96C92 435 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ZBED6CLQ96FA7 236 aaPredicted RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 COL21A1Q96P44 957 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 BBS4Q96RK4 519 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 KCNA7Q96RP8 456 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 HBEGFQ99075 208 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LMF2Q9BU23 707 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 GATA5Q9BWX5 397 aaPredicted RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 TRIM8Q9BZR9 551 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 OR2B2Q9GZK3 357 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 DEFB127Q9H1M4 99 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LDAHQ9H6V9 325 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 METTL7AQ9H8H3 244 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CALHM2Q9HA72 323 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FOLH1BQ9HBA9 442 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 C3orf14Q9HBI5 128 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LRTM1Q9HBL6 345 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 KCNJ16Q9NPI9 418 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 MIEF1Q9NQG6 463 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 GPATCH2Q9NW75 528 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ASIC5Q9NY37 505 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 BCAP29Q9UHQ4 241 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 SH3BGRL2Q9UJC5 107 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 RAB21Q9UL25 225 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 DTX4Q9Y2E6 619 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 FAM215AQ9Y5M1 114 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 LIPGQ9Y5X9 500 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 GTF3C1Q12789 2109 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ATP6AP2A0A1C7CYW4 349 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 MBD3L4A6NDZ8 208 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 MBD3L3A6NE82 208 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 MBD3L5A6NJ08 208 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ENO4A6NNW6 628 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TMEM114B3SHH9 223 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NPIPA2E9PIF3 369 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NPIPA3F8WFD2 350 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 LSM1O15116 133 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 TM9SF1O15321 606 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 BIRC5O15392 142 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TYROBPO43914 113 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ICOSLGO75144 302 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SEC22BO75396 215 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 LYPLA1O75608 230 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ATP6AP2O75787 350 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TOXO94900 526 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 IL18BPO95998 194 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NGFRP08138 427 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 INHBBP09529 407 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 GLI4P10075 376 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CHMP24386 653 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ALDH3A1P30838 453 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SRD5A2P31213 254 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CEACAM8P31997 349 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 KRT20P35900 424 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms