RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MED16Q9Y2X0 877 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 A6NHS1 94 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 GALTP07902 379 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 IGFBP1P08833 259 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 TPT1P13693 172 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 BPIP17213 487 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 HOXB9P17482 250 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 NDUFV2P19404 249 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 HSD11B2P80365 405 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 F2RL3Q96RI0 385 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 GPN2Q9H9Y4 310 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 RTCAO00442 366 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 LYRM1O43325 122 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 NXPH3O95157 252 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 DPP6P42658 865 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 CRISP1P54107 249 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 SLC14A1Q13336 389 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 SYT14Q8NB59 555 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 BSCL2Q96G97 398 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 FAM71F1Q96KD3 344 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 CEPT1Q9Y6K0 416 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 A0A0B4J2A0 478 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 PRAMEF2O60811 474 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 CD163Q86VB7 1156 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 HS6ST2Q96MM7 605 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 DNAJC5Q9H3Z4 198 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 SHPKQ9UHJ6 478 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 RHBDD3Q9Y3P4 386 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 A8MXE2 369 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 SCAF4O95104 1147 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 SFTPDP35247 375 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 TBPL1P62380 186 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 GTDC1Q4AE62 458 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 CPOQ8IVL8 374 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 GPR137CQ8N3F9 429 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 CYB561A3Q8NBI2 242 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 PEX11GQ96HA9 241 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 EOMESO95936 686 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ALDOAP04075 364 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 CD79AP11912 226 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 TIA1P31483 386 aaKnown RBP eCLIP7.49□□□□□ -1.21
CIITA-201ENST00000324288 HTRA4P83105 476 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 SSX9Q7RTT3 188 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 C12orf76Q8N812 135 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 DERL2Q9GZP9 239 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 B4GALT7Q9UBV7 327 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 TRAPPC13A5PLN9 417 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 NME4O00746 187 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 MAGEB4O15481 346 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 ETFAP13804 333 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 STK11Q15831 433 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 AVPI1Q5T686 147 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 NAA50Q9GZZ1 169 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 B4GALT6Q9UBX8 382 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 FBXL2Q9UKC9 423 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ACTL6BO94805 426 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ADH1BP00325 375 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 EIF2DP41214 584 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 ARRB1P49407 418 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 SHC2P98077 582 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 OR52W1Q6IF63 320 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ZNF783Q6ZMS7 281 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ASPGQ86U10 573 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 OR5D16Q8NGK9 328 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 FNDC9Q8TBE3 224 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 DEFB126Q9BYW3 111 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 C2orf42Q9NWW7 574 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 A0A0G2JLL6 359 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 PNMTP11086 282 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ITGB8P26012 769 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 FUT2Q10981 343 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 EBPQ15125 230 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 OR4D1Q15615 310 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ARHGAP11AQ6P4F7 1023 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 Q6ZVL8 140 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 MYLIPQ8WY64 445 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 GPRC5BQ9NZH0 403 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 ANKRD26Q9UPS8 1709 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 PLXNB1O43157 2135 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 RGPD8O14715 1765 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 A0A1W2PS29 197 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 I6L893 689 aaPredicted RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 KIAA0355O15063 1070 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 GSRP00390 522 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 RHCEP18577 417 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 LIX1LQ8IVB5 337 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ACBD7Q8N6N7 88 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 DUSP19Q8WTR2 217 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 G6PC3Q9BUM1 346 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 KATNBL1Q9H079 304 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 PARP12Q9H0J9 701 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 SMOC2Q9H3U7 446 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 SCN5AQ14524 2016 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ATRNO75882 1429 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ANHXE9PGG2 379 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 RACK1P63244 317 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms