RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DACT2Q5SW24 774 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PLEKHH3Q7Z736 793 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZMIZ2Q8NF64 920 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 OR4D10Q8NGI6 311 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 OR5D16Q8NGK9 328 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GPR150Q8NGU9 434 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ESAMQ96AP7 390 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SLC2A11Q9BYW1 496 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TEX13DA0A0J9YY54 714 aaPredicted RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 LEUTXA8MZ59 168 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ARNTLO00327 626 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 BHLHE40O14503 412 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 B3GALT2O43825 422 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ASGR1P07306 291 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 NDUFV2P19404 249 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PYCR1P32322 319 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CBFBQ13951 182 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 NUP54Q7Z3B4 507 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CLEC14AQ86T13 490 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SKA3Q8IX90 412 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 BOLLQ8N9W6 283 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 OR6K2Q8NGY2 324 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF514Q96K75 400 aaPredicted RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 NPY6RQ99463 290 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MINDY3Q9H8M7 445 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 APMAPQ9HDC9 416 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 OR2S2Q9NQN1 319 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZCCHC3Q9NUD5 404 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FBXL21Q9UKT6 434 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SCML1Q9UN30 329 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CYP8B1Q9UNU6 501 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GPR52Q9Y2T5 361 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RBM7Q9Y580 266 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 A0A0B4J203 849 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 DBIP07108 87 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 JUNDP17535 347 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 S1PR1P21453 382 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 FXYD6P3P58550 94 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 WDR5P61964 334 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 MC1RQ01726 317 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TNK1Q13470 666 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 EXOSC2Q13868 293 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 IRF4Q15306 451 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 MINDY4Q4G0A6 757 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SFRP4Q6FHJ7 346 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 LPCAT3Q6P1A2 487 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 FIP1L1Q6UN15 594 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR4M1Q8NGD0 313 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR56A3Q8NH54 315 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR14A2Q96R54 314 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HRH4Q9H3N8 390 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ACOXLQ9NUZ1 547 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 WIF1Q9Y5W5 379 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 WTIPA6NIX2 430 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 B4DXG7 233 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HTR4Q13639 388 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 UGT3A2Q3SY77 523 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 IL17RDQ8NFM7 739 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR2AP1Q8NGE2 309 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR2A12Q8NGT7 310 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PROKR1Q8TCW9 393 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 IMP3Q9NV31 184 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 LIPT1Q9Y234 373 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TCF20Q9UGU0 1960 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SMIM28A0A1B0GU29 152 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZCWPW2A0A1B0GU75 182 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 CASC3O15234 703 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GRM6O15303 877 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ADH1AP07327 375 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 MMP3P08254 477 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ATP1B2P14415 290 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NAGAP17050 411 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 AMY2BP19961 511 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 DAPP51397 102 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HCCSP53701 268 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TAS2R19P59542 299 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 EEF1A1P68104 462 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 EEF1A2Q05639 463 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 EEF1A1P5Q5VTE0 462 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ADGRG3Q86Y34 549 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ARNTL2Q8WYA1 636 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GGHQ92820 318 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NIPSNAP3BQ9BS92 247 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 RAB11FIP5Q9BXF6 653 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 THSD1Q9NS62 852 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SEMA4GQ9NTN9 838 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PPP1R14DQ9NXH3 145 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ADAM18Q9Y3Q7 739 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZFP37Q9Y6Q3 630 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZDBF2Q9HCK1 2354 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 LOC105369274A0A096LPK9 316 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 A8MVJ9 347 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF878C9JN71 531 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SIGLEC6O43699 453 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 CSO75390 466 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PTAFRP25105 342 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ADH7P40394 386 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 POLR2GP62487 172 aaKnown RBP eCLIP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms