RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ICKQ9UPZ9 632 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CLCA3PQ9Y6N3 262 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OR1I1O60431 355 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NDUFV2P19404 249 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ITGB7P26010 798 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 IMPA1P29218 277 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 GIPRP48546 466 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CCR9P51686 369 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ARHGAP19Q14CB8 494 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PAN3Q58A45 887 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC35D2Q76EJ3 337 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CBARPQ8N350 705 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF433Q8N7K0 673 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OR52J3Q8NH60 311 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 C16orf58Q96GQ5 468 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 LRR1Q96L50 414 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PRRC1Q96M27 445 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TCEAL2Q9H3H9 227 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 GSTO2Q9H4Y5 243 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 IGSF5Q9NSI5 407 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 DUS2Q9NX74 493 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 REV1Q9UBZ9 1251 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC6A5Q9Y345 797 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PQLC2LA1A4F0 135 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR7A17O14581 309 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SCAMP2O15127 329 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HOXC11O43248 304 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HCRTR2O43614 444 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MT-CO2P00403 227 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PRKCGP05129 697 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CPEP16870 476 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CELP19835 753 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CR2P20023 1033 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ATP5A1P25705 553 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GNALP38405 381 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GRK6P43250 576 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 F2RL1P55085 397 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TAS2R20P59543 309 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MFSD13AQ14CX5 517 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 UNC50Q53HI1 259 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SPANXN4Q5MJ08 99 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 KIAA0319Q5VV43 1072 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 PDE12Q6L8Q7 609 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FAHD2BQ6P2I3 314 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 THOC6Q86W42 341 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ARHGAP12Q8IWW6 846 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 HORMAD2Q8N7B1 307 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 IL17RDQ8NFM7 739 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 POC1BQ8TC44 478 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GRIN3AQ8TCU5 1115 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 BCL7CQ8WUZ0 217 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ARNTL2Q8WYA1 636 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GLYATL1Q969I3 302 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FAHD2AQ96GK7 314 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CCDC120Q96HB5 630 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR14A2Q96R54 314 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC7A5P2Q9GIP4 190 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MIR1-1HGQ9H1L0 117 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 GPR83Q9NYM4 423 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 KIAA1522Q9P206 1035 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 NOSIPQ9Y314 301 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ASH1LQ9NR48 2969 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 E9PI62 339 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ARHGAP33O14559 1287 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CACNG3O60359 315 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RPA2P15927 270 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CSNK2A2P19784 350 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 S1PR1P21453 382 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 WEE1P30291 646 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SSR2P43308 183 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 RFX2P48378 723 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 AFF3P51826 1226 aaKnown RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 VAMP2P63027 116 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SHC2P98077 582 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SELENBP1Q13228 472 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SF3B4Q15427 424 aaKnown RBP eCLIP4.27□□□□□ -1.737e-7■■■■□ 22.8
CNOT1-201ENST00000317147 FXNQ16595 210 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC25A30Q5SVS4 291 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SMARCD3Q6STE5 483 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SCIMPQ6UWF3 145 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C19orf35Q6ZS72 473 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 FAM71CQ8NEG0 241 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR4D10Q8NGI6 311 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR6T1Q8NGN1 323 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OR10K1Q8NGX5 313 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 MALSU1Q96EH3 234 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SYT3Q9BQG1 590 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 C20orf27Q9GZN8 174 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SPATC1LQ9H0A9 340 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC25A31Q9H0C2 315 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 OSGEPL1Q9H4B0 414 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF736B4DX44 427 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TLX3O43711 291 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-201ENST00000317147 CSF2P04141 144 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 SLC1A3P43003 542 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 ZNF266Q14584 549 aa4.27□□□□□ -1.73
CNOT1-201ENST00000317147 TAF13Q15543 124 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms