RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ENDOUP21128 410 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 PTGER1P34995 402 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 ST3GAL3Q11203 375 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 SF3A2Q15428 464 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 INAVAQ3KP66 663 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 C14orf28Q4W4Y0 310 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 FCRL6Q6DN72 434 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 FBXO42Q6P3S6 717 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 FIGLAQ6QHK4 219 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 LYSMD2Q8IV50 215 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 CYP4Z2PQ8N1L4 340 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 IQCF1Q8N6M8 205 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 NT5CQ8TCD5 201 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 RSC1A1Q92681 617 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 GTPBP2Q9BX10 602 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 ANKRD19PQ9H560 264 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 EXOSC4Q9NPD3 245 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 EVA1BQ9NVM1 165 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 NCDNQ9UBB6 729 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 POMT2Q9UKY4 750 aa13.23□□□□□ -0.29
VRK3-201ENST00000316763 DIMT1Q9UNQ2 313 aaKnown RBP13.23□□□□□ -0.29
VRK3-201ENST00000316763 A0A075B6Q4 140 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 A0A0J9YY10 115 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 URADA6NGE7 173 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 LOC110117498-PIK3R3F6TDL0 507 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 PRKYO43930 277 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CTSVO60911 334 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 UBXN7O94888 489 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 SLC35G6P0C7Q6 338 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 MAN2A2P49641 1150 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 RPS3AP61247 264 aaKnown RBP13.22□□□□□ -0.29
VRK3-201ENST00000316763 CDC20Q12834 499 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 MLLT11Q13015 90 aaPredicted RBP13.22□□□□□ -0.29
VRK3-201ENST00000316763 SNAPC1Q16533 368 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 ZNF438Q7Z4V0 828 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 VN1R4Q7Z5H5 301 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 HMGN2P46Q86SG4 172 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CEP19Q96LK0 163 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 SLC38A2Q96QD8 506 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 OR2A5Q96R48 311 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CNPPD1Q9BV87 410 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 TEX12Q9BXU0 123 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
VRK3-201ENST00000316763 SLC38A1Q9H2H9 487 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 HHATLQ9HCP6 504 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 CLEC2DQ9UHP7 191 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 STUB1Q9UNE7 303 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 KCNE3Q9Y6H6 103 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 OTOGLQ3ZCN5 2332 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 ARID1BQ8NFD5 2236 aaPredicted RBP13.22□□□□□ -0.29
VRK3-201ENST00000316763 WDR87Q6ZQQ6 2873 aa13.22□□□□□ -0.29
VRK3-201ENST00000316763 LNP1A1A4G5 178 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 TBX1O43435 398 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 GPX5O75715 221 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 CER1O95813 267 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ZNF888P0CJ79 500 aaPredicted RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 CPN2P22792 545 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 TLX1P31314 330 aaPredicted RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 PRKAR1BP31321 381 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ETV6P41212 452 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 CAPZBP47756 277 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 PPP1CAP62136 330 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 CHRNEQ04844 493 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 SYT14P1Q58G82 188 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ACSM5Q6NUN0 579 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 SLC27A4Q6P1M0 643 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 KANSL1Q7Z3B3 1105 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 PARP16Q8N5Y8 322 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 KAT2AQ92830 837 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 TM4SF19Q96DZ7 209 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 LRR1Q96L50 414 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ZNF582Q96NG8 517 aaPredicted RBP13.21□□□□□ -0.29
VRK3-201ENST00000316763 ASPNQ9BXN1 380 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 CTPS2Q9NRF8 586 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 SSR3Q9UNL2 185 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 ZNF232Q9UNY5 417 aa13.21□□□□□ -0.29
VRK3-201ENST00000316763 A0A087WUU8 490 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 PROB1E7EW31 1015 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 AP3D1O14617 1153 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 TYRP1P17643 537 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 MYL12AP19105 171 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.3
VRK3-201ENST00000316763 TNFRSF17Q02223 184 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 TSPAN31Q12999 210 aa13.21□□□□□ -0.3
VRK3-201ENST00000316763 FAM214AQ32MH5 1076 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms