RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RFKQ969G6 155 aa12.95□□□□□ -0.34
VAMP2-201ENST00000316509 CLDN23Q96B33 292 aa12.95□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF582Q96NG8 517 aaPredicted RBP12.95□□□□□ -0.34
VAMP2-201ENST00000316509 DCSTAMPQ9H295 470 aa12.95□□□□□ -0.34
VAMP2-201ENST00000316509 ISYNA1Q9NPH2 558 aa12.95□□□□□ -0.34
VAMP2-201ENST00000316509 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.95□□□□□ -0.34
VAMP2-201ENST00000316509 SLCO1B1Q9Y6L6 691 aa12.95□□□□□ -0.34
VAMP2-201ENST00000316509 A0A0A6YYC8 382 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 KDM4EB2RXH2 506 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 I3L1I5 382 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 M0R129 80 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF749O43361 778 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 FRS3O43559 492 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 HCRTR1O43613 425 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 RAB36O95755 333 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CT62P0C5K7 136 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 GADD45AP24522 165 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 MLLT3P42568 568 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 NCS1P62166 190 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF155Q12901 538 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 SLC13A2Q13183 592 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 GRM7Q14831 915 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 C3orf38Q5JPI3 329 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 NKAIN4Q8IVV8 208 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CDK20Q8IZL9 346 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 DNASE2BQ8WZ79 361 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 LRR1Q96L50 414 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 DGAT2Q96PD7 388 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 FOLH1BQ9HBA9 442 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CTPS2Q9NRF8 586 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CHCHD3Q9NX63 227 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CCDC59Q9P031 241 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 LSM2Q9Y333 95 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CSNK1G3Q9Y6M4 447 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 KCNK2O95069 426 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 ENDOUP21128 410 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 SPHARQ15513 63 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 MED22Q15528 200 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 OR1Q1Q15612 314 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 MAPK14Q16539 360 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 MINDY4Q4G0A6 757 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 MRPL2Q5T653 305 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 TUBA3EQ6PEY2 450 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 SLC15A4Q8N697 577 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 OR9Q1Q8NGQ5 310 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 PIK3R3Q92569 461 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 FAM46AQ96IP4 442 aaKnown RBP12.94□□□□□ -0.34
VAMP2-201ENST00000316509 IER2Q9BTL4 223 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 G6PC3Q9BUM1 346 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 TAPBPLQ9BX59 468 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 ALOXE3Q9BYJ1 711 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 AKIP1Q9NQ31 210 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 CDH10Q9Y6N8 788 aa12.94□□□□□ -0.34
VAMP2-201ENST00000316509 RHPN2P1A8MT19 583 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 FOXD2O60548 495 aaPredicted RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 THY1P04216 161 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 LSM3P62310 102 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 PRKCDQ05655 676 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 MLLT11Q13015 90 aaPredicted RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 EXOSC7Q15024 291 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 DEFB110Q30KQ9 67 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 NRMQ8IXM6 262 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 SLC34A3Q8N130 599 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 POGLUT1Q8NBL1 392 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 PPP1R14BQ96C90 147 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 MVB12AQ96EY5 273 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 PRSS27Q9BQR3 290 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 NXF2Q9GZY0 626 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 ERVMER34-1Q9H9K5 563 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 HRO43593 1189 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 OPRL1P41146 370 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 EMDP50402 254 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 MLLT10P55197 1068 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 FUT7Q11130 342 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 CCDC85BQ15834 202 aaPredicted RBP12.93□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF141Q15928 474 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 WDR45BQ5MNZ6 344 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF620Q6ZNG0 422 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 Q6ZNX1 250 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 ZNF550Q7Z398 422 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 IQCF1Q8N6M8 205 aa12.93□□□□□ -0.34
VAMP2-201ENST00000316509 RPL3LQ92901 407 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms