RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ADAM29Q9UKF5 820 aa10.47□□□□□ -0.73
SMIM4-201ENST00000307106 POU2F3Q9UKI9 436 aa10.47□□□□□ -0.73
SMIM4-201ENST00000307106 PSME2Q9UL46 239 aa10.47□□□□□ -0.73
SMIM4-201ENST00000307106 ZNF780BQ9Y6R6 833 aa10.47□□□□□ -0.73
SMIM4-201ENST00000307106 IGHV4-61A0A0C4DH41 118 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ADAMDEC1O15204 470 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 COL6A2P12110 1019 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 STMN1P16949 149 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ZNF17P17021 662 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ALDH9A1P49189 494 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 CLK3P49761 638 aaKnown RBP10.46□□□□□ -0.73
SMIM4-201ENST00000307106 PDLIM4P50479 330 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 FABP6P51161 128 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ERCC6LQ2NKX8 1250 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 HBMQ6B0K9 141 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 SLC22A25Q6T423 547 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 Q6ZSR9 355 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ESPNLQ6ZVH7 1005 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 PAGE2Q7Z2X7 111 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ISCA2Q86U28 154 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 MARCH3Q86UD3 253 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 TDRPQ86YL5 185 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ANKMY2Q8IV38 441 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 TUSC5Q8IXB3 177 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 OR2W6PQ8NHA6 318 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 RNF128Q8TEB7 428 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 KAT2AQ92830 837 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 LRRC39Q96DD0 335 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 MS4A14Q96JA4 679 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ZNF681Q96N22 645 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 ATOH8Q96SQ7 321 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 MRPL1Q9BYD6 325 aaKnown RBP10.46□□□□□ -0.73
SMIM4-201ENST00000307106 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
SMIM4-201ENST00000307106 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 PFDN4Q9NQP4 134 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 AHSPQ9NZD4 102 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 KLHL13Q9P2N7 655 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 RNF11Q9Y3C5 154 aa10.46□□□□□ -0.73
SMIM4-201ENST00000307106 A0A0J9YW62 118 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 GOLGA8QA0A0J9YX86 632 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 GOLGA8OA6NCC3 632 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF814B7Z6K7 855 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 GOLGA8NF8WBI6 632 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 GOLGA8RI6L899 631 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 NDUFS8O00217 210 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 NDUFB5O43674 189 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 KERAO60938 352 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 PIAS1O75925 651 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 LYZL6O75951 148 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 PABPC4LP0CB38 370 aaKnown RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 BMP4P12644 408 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 CREB1P16220 341 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 DEFA6Q01524 100 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 SPOCK1Q08629 439 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 C17orf67Q0P5P2 114 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 ILF2Q12905 390 aaKnown RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 RNPS1Q15287 305 aaKnown RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 SH2D4BQ5SQS7 431 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 B3GLCTQ6Y288 498 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 SSX8Q7RTT4 187 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 CCDC116Q8IYX3 515 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 SEMA6DQ8NFY4 1073 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 OR9A2Q8NGT5 310 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 TRPC4APQ8TEL6 797 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 REXO5Q96IC2 774 aaKnown RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 SOX7Q9BT81 388 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 TMEM185BQ9H7F4 350 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 IPPKQ9H8X2 491 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 FAM120CQ9NX05 1096 aaKnown RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 TMEFF2Q9UIK5 374 aaPredicted RBP10.45□□□□□ -0.74
SMIM4-201ENST00000307106 MGAT4BQ9UQ53 548 aa10.45□□□□□ -0.74
SMIM4-201ENST00000307106 TRRAPQ9Y4A5 3859 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 IGLV3-32A0A0A0MS00 114 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 A0A0A6YYJ9 748 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 SERINC4A6NH21 518 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 SLCO1B7G3V0H7 640 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 DHRS4L1P0CG22 281 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 CTAGE8P0CG41 777 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ARL1P40616 181 aaPredicted RBP10.44□□□□□ -0.74
SMIM4-201ENST00000307106 FNTAP49354 379 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 RAB10P61026 200 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 RAC1P63000 192 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 PSG6Q00889 435 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 GTF2H2Q13888 395 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ACAP2Q15057 778 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ZKSCAN8Q15776 578 aaPredicted RBP10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF239Q16600 458 aaKnown RBP10.44□□□□□ -0.74
SMIM4-201ENST00000307106 IQCCQ4KMZ1 466 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 PRR31Q5SQ13 230 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TIMM23BQ5SRD1 257 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 PDSS1Q5T2R2 415 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 ZNF544Q6NX49 715 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 GTF2H2CQ6P1K8 395 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TMEM108Q6UXF1 575 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 Q6ZT83 130 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 COMMD6Q7Z4G1 85 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 TBC1D1Q86TI0 1168 aaPredicted RBP10.44□□□□□ -0.74
SMIM4-201ENST00000307106 CTAGE4Q8IX94 777 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 METTL4Q8N3J2 472 aa10.44□□□□□ -0.74
SMIM4-201ENST00000307106 L3MBTL4Q8NA19 623 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms