RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 RNF138Q8WVD3 245 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RAB8BQ92930 207 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GNRHR2Q96P88 292 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SDF2Q99470 211 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PAIP1Q9H074 479 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PTGES2Q9H7Z7 377 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CACYBPQ9HB71 228 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 POLE3Q9NRF9 147 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 THUMPD1Q9NXG2 353 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FLRT3Q9NZU0 649 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CORO2BQ9UQ03 480 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LIPT1Q9Y234 373 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 WDR45Q9Y484 360 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 KCNE3Q9Y6H6 103 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NPIPA5A0A0B4J1W7 369 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRGV8A0A0C4DH27 118 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 A0A1B0GTH9 108 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 A0A1W2PQD3 144 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 BBIP1A8MTZ0 92 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EVPLLA8MZ36 301 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ALG1L2C9J202 215 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FAM47E-STBD1D6RA91 191 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NPIPA7E9PJI5 369 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CLIC1O00299 241 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HMGN4O00479 90 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PRRG2O14669 202 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SUSD5O60279 629 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FADS1O60427 444 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SLC19A2O60779 497 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 IGHG3P01860 377 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TPOP07202 933 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RFPL3SP0C7P2 107 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NPIPA8P0DM63 369 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NR2F1P10589 423 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ADSLP30566 484 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PTGS2P35354 604 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ATP12AP54707 1039 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DSTNP60981 165 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FADDQ13158 208 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NFYCQ13952 458 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GNA13Q14344 377 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GANABQ14697 944 aaKnown RBP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PAGE3Q5JUK9 113 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LRIF1Q5T3J3 769 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FNDC7Q5VTL7 733 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR5M10Q6IEU7 315 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HEPHL1Q6MZM0 1159 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRILQ7L0X0 811 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MTERF4Q7Z6M4 381 aaKnown RBP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZAR1Q86SH2 424 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MARCH3Q86UD3 253 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SPPL2CQ8IUH8 684 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GATSQ8NAP1 163 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR14L1PQ8NHC6 308 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PHOSPHO1Q8TCT1 267 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PHF3Q92576 2039 aaKnown RBP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SARAFQ96BY9 339 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ROPN1LQ96C74 230 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NMUR2Q9GZQ4 415 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF350Q9GZX5 532 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SLC6A15Q9H2J7 730 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ACKR4Q9NPB9 350 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SAR1AQ9NR31 198 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SLC6A13Q9NSD5 602 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FBXO34Q9NWN3 711 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CALML5Q9NZT1 146 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SH3BGRL2Q9UJC5 107 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LIPGQ9Y5X9 500 aa10.03□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HEATR5AQ86XA9 2040 aa10.02□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C15orf38-AP3S2A0A0A6YYH1 394 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 A0A1B0GUH1 482 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 OR14I1A6ND48 311 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NPIPA2E9PIF3 369 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 NPIPA3F8WFD2 350 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 GTPBP1O00178 669 aaKnown RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 AQP7O14520 342 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 BCKDKO14874 412 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SLC22A2O15244 555 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 GMFGO60234 142 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 KIAA0513O60268 411 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 HPNP05981 417 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 BCHEP06276 602 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 CELA3AP09093 270 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ETFAP13804 333 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ENDOUP21128 410 aaKnown RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DRD4P21917 467 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 SRD5A2P31213 254 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ZNF41P51814 821 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 GAS1P54826 345 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 DSCR4P56555 118 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 PER3P56645 1201 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 KLF10Q13118 480 aa10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P2Y-201ENST00000306853 COX20Q5RI15 118 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms