RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 YIF1BQ5BJH7 314 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SMARCD3Q6STE5 483 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 MARCH9Q86YJ5 346 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 DTX3Q8N9I9 347 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 ZNF485Q8NCK3 441 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SPRYD4Q8WW59 207 aaPredicted RBP14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SAMD8Q96LT4 415 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SOSTQ9BQB4 213 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 MKRN2Q9H000 416 aaKnown RBP14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SYNDIG1Q9H7V2 258 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SLC7A7Q9UM01 511 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.12□□□□□ -0.15
CSDC2-201ENST00000306149 FAM25AB3EWG3 89 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 FAM25CB3EWG5 89 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 FAM25GB3EWG6 89 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 NDUFB5O43674 189 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 GAAP10253 952 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 CPN2P22792 545 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 FCARP24071 287 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 AHRP35869 848 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 AGERQ15109 404 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 AADACL4Q5VUY2 407 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 CNIH2Q6PI25 160 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 MTSS1LQ765P7 747 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 ZNF438Q7Z4V0 828 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 KLBQ86Z14 1044 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 CPOQ8IVL8 374 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 TCTE3Q8IZS6 198 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 SLC41A3Q96GZ6 507 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 ENKD1Q9H0I2 346 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 RSPH9Q9H1X1 276 aaPredicted RBP14.12□□□□□ -0.15
CSDC2-201ENST00000306149 ISG20L2Q9H9L3 353 aaKnown RBP14.12□□□□□ -0.15
CSDC2-201ENST00000306149 FGF22Q9HCT0 170 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 CA5BQ9Y2D0 317 aa14.12□□□□□ -0.15
CSDC2-201ENST00000306149 TRDV1A0A1B0GX56 115 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 HRO43593 1189 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 TRIM3O75382 744 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 GKN3PP0CG01 181 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PRG2P13727 222 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PTBP1P26599 531 aaKnown RBP eCLIP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 IGFALSP35858 605 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 GPR68Q15743 365 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 METAP1DQ6UB28 335 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 FRRS1Q6ZNA5 592 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 VN1R4Q7Z5H5 301 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 OR51G2Q8NGK0 314 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 GRPEL2Q8TAA5 225 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 ACOT11Q8WXI4 607 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 ACTRT3Q9BYD9 372 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 HINT3Q9NQE9 182 aaKnown RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 KLHL28Q9NXS3 571 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 TBC1D29Q9UFV1 150 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NPIPA5A0A0B4J1W7 369 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 ZNF860A6NHJ4 632 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NPIPA7E9PJI5 369 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 SYT5O00445 386 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NPIPA8P0DM63 369 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CMPK1P30085 196 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 MAP2K3P46734 347 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CD83Q01151 205 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PUS10Q3MIT2 529 aaKnown RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PAMR1Q6UXH9 720 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 LIX1LQ8IVB5 337 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 SIRT6Q8N6T7 355 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 LCN9Q8WX39 176 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NR4A3Q92570 626 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 SENP5Q96HI0 755 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 COQ7Q99807 217 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 TIMM29Q9BSF4 260 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 SLC17A9Q9BYT1 436 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PRRG3Q9BZD7 231 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 PPP1R3EQ9H7J1 279 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 GABRPO00591 440 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 SLC2A2P11168 524 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 RIN1Q13671 783 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 FAM214AQ32MH5 1076 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 DEFB134Q4QY38 66 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 TIGD3Q6B0B8 471 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NRROSQ86YC3 692 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 Q8N402 240 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 POGLUT1Q8NBL1 392 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CCL4L1Q8NHW4 92 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 NEIL3Q8TAT5 605 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 ZNF649Q9BS31 505 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 IL20Q9NYY1 176 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 KLHL21Q9UJP4 597 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CBLCQ9ULV8 474 aa14.11□□□□□ -0.15
CSDC2-201ENST00000306149 CEP290O15078 2479 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 ERVK-21P61565 698 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 IL18Q14116 193 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 DUSP5Q16690 384 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 PGGHGQ32M88 737 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 TRMT12Q53H54 448 aaKnown RBP14.1□□□□□ -0.15
CSDC2-201ENST00000306149 PRAMEF8Q5VWM4 474 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 PRAMEF7Q5VXH5 474 aa14.1□□□□□ -0.15
CSDC2-201ENST00000306149 TRIQKQ629K1 86 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms