RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PSPHP78330 225 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 BTN3A2P78410 334 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 REEP5Q00765 189 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 PRDX1Q06830 199 aaKnown RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF767PQ75MW2 155 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 KIF18BQ86Y91 864 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 VWA5B2Q8N398 1253 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CEP76Q8TAP6 659 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CAMK1GQ96NX5 476 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SPATA5L1Q9BVQ7 753 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 SRRQ9GZT4 340 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 LIN7BQ9HAP6 207 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 BEX1Q9HBH7 125 aa12.6□□□□□ -0.39
CTDP1-202ENST00000299543 H2AFY2Q9P0M6 372 aaPredicted RBP12.6□□□□□ -0.39
CTDP1-202ENST00000299543 A0A075B6Q4 140 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 IGKV1-8A0A0C4DH67 115 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 FABP7O15540 132 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 IFNA16P05015 189 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 LINC00271P0C7V0 271 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 APEX1P27695 318 aaKnown RBP12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF81P51508 661 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 CDH11P55287 796 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 RGS8P57771 180 aaPredicted RBP12.59□□□□□ -0.39
CTDP1-202ENST00000299543 MLF2Q15773 248 aaPredicted RBP12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ATP6V1C2Q8NEY4 427 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 OR4E2Q8NGC2 313 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 OR52H1Q8NGJ2 320 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ZCCHC10Q8TBK6 192 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 ST8SIA4Q92187 359 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 SLC38A2Q96QD8 506 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 C3orf14Q9HBI5 128 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 MAN2C1Q9NTJ4 1040 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 NDUFB11Q9NX14 153 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 SPHK1Q9NYA1 384 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 C4orf51C9J302 202 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 EFCAB14O75071 495 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 SLC2A10O95528 541 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 CD8BP10966 210 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 CBX5P45973 191 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 WNT4P56705 351 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 KLHL12Q53G59 568 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 VITQ6UXI7 678 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 PLCZ1Q86YW0 608 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 NKAIN4Q8IVV8 208 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 C9orf62Q8N4C0 152 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 NUP43Q8NFH3 380 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 PCBD2Q9H0N5 130 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 MGAT4AQ9UM21 535 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 GSTK1Q9Y2Q3 226 aa12.59□□□□□ -0.39
CTDP1-202ENST00000299543 GSAPA4D1B5 854 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 CARNS1A5YM72 827 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 ARRDC5A6NEK1 342 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 LGALS8O00214 317 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 NARSO43776 548 aaKnown RBP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 EPPINO95925 133 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 ALAS2P22557 587 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 MAN2A2P49641 1150 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 SGCGQ13326 291 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 KLHL22Q53GT1 634 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 RNASE12Q5GAN4 147 aaKnown RBP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 RASSF6Q6ZTQ3 369 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF765Q7L2R6 523 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 KCT2Q8NC54 265 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 OR8D4Q8NGM9 314 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 UFD1Q92890 307 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 UPRTQ96BW1 309 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 POLDIP3Q9BY77 421 aaKnown RBP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 ACSS1Q9NUB1 689 aaPredicted RBP12.58□□□□□ -0.39
CTDP1-202ENST00000299543 B3GNT2Q9NY97 397 aa12.58□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 A6NIN4 97 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 AIFM1O95831 613 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 LGI1O95970 557 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ALPPP05187 535 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
CTDP1-202ENST00000299543 LIMK1P53667 647 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ERVK-21P61565 698 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 RGS1Q08116 209 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 MAB21L1Q13394 359 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 IL18Q14116 193 aa12.58□□□□□ -0.4
CTDP1-202ENST00000299543 ASB18Q6ZVZ8 466 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms