RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DPH1Q9BZG8 443 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TMEM27Q9HBJ8 222 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TESQ9UGI8 421 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 AGRPO00253 132 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 SLC1A3P43003 542 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 OMPP47874 163 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 ZNF542PQ5EBM4 170 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 RAB43Q86YS6 212 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 NT5CQ8TCD5 201 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 OR2A5Q96R48 311 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 TBX5Q99593 518 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 BARHL1Q9BZE3 327 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 FGF20Q9NP95 211 aaPredicted RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 LOC105369274A0A096LPK9 316 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 LOC102723532A0A0G2JNH3 316 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 P2RX6O15547 441 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 KCNK2O95069 426 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 GABRA3P34903 492 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 ZNF836Q6ZNA1 936 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 Q6ZSR6 202 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 OR4N4Q8N0Y3 316 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 OR2A14Q96R47 310 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 PIGUQ9H490 435 aa12.7□□□□□ -0.38
CDH8-201ENST00000299345 RBMX2Q9Y388 322 aaKnown RBP12.7□□□□□ -0.38
CDH8-201ENST00000299345 TNFP01375 233 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 PSPHP78330 225 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 DOC2BQ14184 412 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 DCST2Q5T1A1 773 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 PLBD1Q6P4A8 553 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 NCCRP1Q6ZVX7 275 aaPredicted RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 CSNK1A1LQ8N752 337 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 CDRT4Q8N9R6 151 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 C19orf18Q8NEA5 215 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 FANK1Q8TC84 345 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 PATE1Q8WXA2 126 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 SLC25A46Q96AG3 418 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 MRGPRX1Q96LB2 322 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 OR51V1Q9H2C8 321 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 ETV6P41212 452 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 HYAL1Q12794 435 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 ZNHIT3Q15649 155 aaPredicted RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 ARHGAP11BQ3KRB8 267 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 ZNF620Q6ZNG0 422 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 USP53Q70EK8 1073 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 NRARPQ7Z6K4 114 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 CELF2-AS1Q8N7Q2 184 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 SYT14Q8NB59 555 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 SIMC1Q8NDZ2 872 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 GRHL3Q8TE85 626 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 BMFQ96LC9 184 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 TYRP1P17643 537 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 TPBGQ13641 420 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 EXOSC7Q15024 291 aaKnown RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 MRPL2Q5T653 305 aaKnown RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 B3GLCTQ6Y288 498 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 ZNF761Q86XN6 746 aaPredicted RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 KLBQ86Z14 1044 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 OR10H4Q8NGA5 316 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 OR4Q3Q8NH05 313 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 NUP210Q8TEM1 1887 aaPredicted RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 MRPL38Q96DV4 380 aaKnown RBP12.69□□□□□ -0.38
CDH8-201ENST00000299345 GIMAP5Q96F15 307 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 C10orf90Q96M02 699 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 MALT1Q9UDY8 824 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 MUTYHQ9UIF7 546 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 SLC22A7Q9Y694 548 aa12.69□□□□□ -0.38
CDH8-201ENST00000299345 TCRBV21S2A2A0A5A6 115 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 DYRK3O43781 588 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 RCBTB2O95199 551 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 GPR75O95800 540 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 GABRA5P31644 462 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
CDH8-201ENST00000299345 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
CDH8-201ENST00000299345 OR2L13Q8N349 312 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 ENKURQ8TC29 256 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 TM9SF4Q92544 642 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 SCARF2Q96GP6 870 aaPredicted RBP12.68□□□□□ -0.38
CDH8-201ENST00000299345 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 MARCH7Q9H992 704 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
CDH8-201ENST00000299345 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms