RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CGREF1Q99674 301 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 GPATCH1Q9BRR8 931 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 ASPNQ9BXN1 380 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 RTN4RQ9BZR6 473 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 RNF32Q9H0A6 362 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 OR51I1Q9H343 314 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 TPT1P8Q9HAU6 139 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 IL1RL2Q9HB29 575 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 C3orf14Q9HBI5 128 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 ZNF71Q9NQZ8 489 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 DEPPQ9NTK1 212 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 PRODH2Q9UF12 536 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 LEF1Q9UJU2 399 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 RALYQ9UKM9 306 aaKnown RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 USP22Q9UPT9 525 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 GMEB1Q9Y692 573 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 CHCHD2Q9Y6H1 151 aaPredicted RBP5.42□□□□□ -1.54
SSX3-201ENST00000298396 RELNP78509 3460 aa5.42□□□□□ -1.54
SSX3-201ENST00000298396 NPIPA5A0A0B4J1W7 369 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CENPVL1A0A0U1RR11 272 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 DYTNA2CJ06 578 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PINLYPA6NC86 204 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 A8MVJ9 347 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NPIPA7E9PJI5 369 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 MKRN2OSH3BPM6 223 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CLIC1O00299 241 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NDUFAB1O14561 156 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 MRASO14807 208 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ACOX3O15254 700 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CCDC22O60826 627 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 COQ9O75208 318 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 UGT2B11O75310 529 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PPM1BO75688 479 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 WISP2O76076 250 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 KCNK2O95069 426 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CHRM4P08173 479 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NPIPA8P0DM63 369 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 OR12D1P0DN82 309 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CCL3P10147 92 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ETFAP13804 333 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 DDX5P17844 614 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 DRD5P21918 477 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PRDX6P30041 224 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 GABRA3P34903 492 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PIGAP37287 484 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CPA2P48052 419 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 TNFSF10P50591 281 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 HLCSP50747 726 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 SSR4P51571 173 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 GAS1P54826 345 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 MTPNP58546 118 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 MRPS22P82650 360 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 CBX1P83916 185 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PRR5P85299 388 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CYLC2Q14093 348 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 OR1C1Q15619 314 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NTRK2Q16620 822 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 TRMT5Q32P41 509 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 PLEKHN1Q494U1 663 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 SPDYE7PQ495Y7 208 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NADK2Q4G0N4 442 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 LACTB2Q53H82 288 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 RABL3Q5HYI8 236 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 COQ5Q5HYK3 327 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 C6orf10Q5SRN2 563 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CCNJQ5T5M9 372 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 C6orf163Q5TEZ5 329 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 SPINK14Q6IE38 97 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 HEPHL1Q6MZM0 1159 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 C6orf89Q6UWU4 347 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 IL20RBQ6UXL0 311 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 APOOLQ6UXV4 268 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 Q6ZS92 163 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ZNF621Q6ZSS3 439 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 SZRD1Q7Z422 152 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 PTOV1Q86YD1 416 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 SLC5A8Q8N695 610 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CDRT4Q8N9R6 151 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CHDHQ8NE62 594 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 VPS37AQ8NEZ2 397 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 OR10G3Q8NGC4 313 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 OR5L2Q8NGL0 311 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 RP9Q8TA86 221 aaKnown RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 C9orf43Q8TAL5 461 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 SLC9A6Q92581 669 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 HAS2Q92819 552 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 RAB8BQ92930 207 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 TMEM125Q96AQ2 219 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 EFHD2Q96C19 240 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 SPACA9Q96E40 222 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 HSPBAP1Q96EW2 488 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 RMND5BQ96G75 393 aaPredicted RBP5.41□□□□□ -1.54
SSX3-201ENST00000298396 SCMH1Q96GD3 660 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ZNF354BQ96LW1 612 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ANKRD27Q96NW4 1050 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 NODALQ96S42 347 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 STACQ99469 402 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 KLHDC3Q9BQ90 382 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 ACTRT3Q9BYD9 372 aa5.41□□□□□ -1.54
SSX3-201ENST00000298396 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms