RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 DBIP07108 87 aaKnown RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 ANKRD34CP0C6C1 535 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 FBLP22087 321 aaKnown RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 GGT2P36268 569 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PGDP52209 483 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 RGS8P57771 180 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 TAS2R41P59536 307 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PSG6Q00889 435 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 MAD2L1BPQ15013 274 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 IGSF11Q5DX21 431 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 TRIM61Q5EBN2 209 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 KLHL17Q6TDP4 642 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 OR2I1PQ8NGU4 316 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 CNDP2Q96KP4 475 aaKnown RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 FBXO34Q9NWN3 711 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 SLC6A14Q9UN76 642 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 ERVK-19Q9WJR5 959 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PCDHGA6Q9Y5G7 932 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 CENPVL1A0A0U1RR11 272 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 A0A1B0GX78 115 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 BRINP1O60477 761 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 UGT2B15P54855 530 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 EEF1A1P68104 462 aaKnown RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 FUT7Q11130 342 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-202ENST00000297979 LINC00471Q8N535 108 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 OR4D9Q8NGE8 314 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PTCHD1Q96NR3 888 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 TPST2O60704 377 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 KCNK2O95069 426 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 CCNYL3P0C7X3 344 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 STK11Q15831 433 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 BROXQ5VW32 411 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 LRRN3Q9H3W5 708 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 VCANP13611 3396 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 CLDN24A6NM45 220 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 ARHGAP33O14559 1287 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 AP3D1O14617 1153 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 NID1P14543 1247 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 TNNI3P19429 210 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 IFNA8P32881 189 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 GSSP48637 474 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 ESRRGP62508 458 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 ACY1Q03154 408 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 MAPK14Q16539 360 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 SLC23A3Q6PIS1 610 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 RBM44Q6ZP01 1051 aaKnown RBP13.23□□□□□ -0.29
C9orf3-202ENST00000297979 B3GNT8Q7Z7M8 397 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 BPIFB6Q8NFQ5 453 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 DIO2Q92813 273 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 UCK2Q9BZX2 261 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 OR10A5Q9H207 317 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 SYNDIG1Q9H7V2 258 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 SRPK3Q9UPE1 567 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 DTX4Q9Y2E6 619 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 NUP210LQ5VU65 1888 aa13.23□□□□□ -0.29
C9orf3-202ENST00000297979 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
C9orf3-202ENST00000297979 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 PEX12O00623 359 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 FMO3P31513 532 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 CXCR4P61073 352 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 PROX2Q3B8N5 592 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 MINDY4Q4G0A6 757 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ARHGAP40Q5TG30 622 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 BORAQ6PGQ7 559 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF600Q6ZNG1 722 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 MOGAT1Q96PD6 335 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 PRR14Q9BWN1 585 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 DGCR6LQ9BY27 220 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 RBM38Q9H0Z9 239 aaKnown RBP13.22□□□□□ -0.29
C9orf3-202ENST00000297979 KCNE5Q9UJ90 142 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 C17orf105B2RV13 164 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 GUSBP08236 651 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 PRKACBP22694 351 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 TRHRP34981 398 aaPredicted RBP13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ST3GAL3Q11203 375 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ENTPD8Q5MY95 495 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 C1orf189Q5VU69 101 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 METTL11BQ5VVY1 283 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 ZC3H14Q6PJT7 736 aaKnown RBP13.22□□□□□ -0.29
C9orf3-202ENST00000297979 KCTD8Q6ZWB6 473 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 MORN4Q8NDC4 146 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms