RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SCAMP1O15126 338 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 HCKP08631 526 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 GIFP27352 417 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 C21orf33P30042 268 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 ELOCQ15369 112 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 DUSP6Q16828 381 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF791Q3KP31 576 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 RASGEF1AQ8N9B8 481 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 GSX2Q9BZM3 304 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 KCNJ16Q9NPI9 418 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 PRMT8Q9NR22 394 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 MYO5AQ9Y4I1 1855 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 FABP7O15540 132 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SRPX2O60687 465 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 DAPP51397 102 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 FOXA1P55317 472 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 AADACL4Q5VUY2 407 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 DGLUCYQ7Z3D6 616 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 GPAT4Q86UL3 456 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 NAGSQ8N159 534 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 C3orf30Q96M34 536 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SMG9Q9H0W8 520 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SDHAF3Q9NRP4 125 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 BABAM2Q9NXR7 383 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 LOC105369274A0A096LPK9 316 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 OR6C74A6NCV1 312 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 WASH3PC4AMC7 463 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 ATP6V1G2-DDX39BF2Z307 99 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 EGFP01133 1207 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 PRSS56P0CW18 603 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 ADRB3P13945 408 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 STK19P49842 368 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 OR4N4Q8N0Y3 316 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 OR6N2Q8NGY6 317 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 GIMAP1Q8WWP7 306 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SSX3Q99909 188 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 COQ3Q9NZJ6 369 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SUSD2Q9UGT4 822 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SPO11Q9Y5K1 396 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 LATO43561 262 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 IFNA10P01566 189 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 IFNA4P05014 189 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SFTPBP07988 381 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 RNF144AP50876 292 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC29A4Q7RTT9 530 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 TCEAL8Q8IYN2 117 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 CLECL1Q8IZS7 167 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ANKRD53Q8N9V6 530 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 C11orf54Q9H0W9 315 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 DNTTIP1Q9H147 329 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ASB6Q9NWX5 421 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 PSMD9O00233 223 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 AHSA1O95433 338 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SDC1P18827 310 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 MLLT10P55197 1068 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 TAS2R38P59533 333 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 FAM122BQ7Z309 247 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 OR2T4Q8NH00 348 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 OR5AK2Q8NH90 309 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF583Q96ND8 569 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 TBL1XR1Q9BZK7 514 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 OCEL1Q9H607 264 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 MVB12BQ9H7P6 319 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC6A5Q9Y345 797 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC35F4A4IF30 521 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 M0R129 80 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 GAPDHSO14556 408 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ADAM12O43184 909 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 LEFTY1O75610 366 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 RAB3DO95716 219 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 PSMB1P20618 241 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 PTPN6P29350 595 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF91Q05481 1191 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 RBMS2Q15434 407 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 GTDC1Q4AE62 458 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF709Q8N972 641 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 HUS1BQ8NHY5 278 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 DYNC2LI1Q8TCX1 351 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF689Q96CS4 500 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 OR2M4Q96R27 311 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 HOXD1Q9GZZ0 328 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 RPS10P5Q9NQ39 176 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 CFAP20Q9Y6A4 193 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF726A6NNF4 738 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 TAS2R19P59542 299 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF648Q5T619 568 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 KDM4DQ6B0I6 523 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SUSD1Q6UWL2 747 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 UBTD2Q8WUN7 234 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SPRYD4Q8WW59 207 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF649Q9BS31 505 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 CENPMQ9NSP4 180 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 TRDV1A0A1B0GX56 115 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 SOCS7O14512 581 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 GP1BBP13224 206 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 ETV3P41162 512 aa16.54■□□□□ 0.24
PCDHA13-201ENST00000289272 LRIT3Q3SXY7 679 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms