RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NADKO95544 446 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 NDUFA9Q16795 377 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 MANEAQ5SRI9 462 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 C1orf94Q6P1W5 598 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 OR51Q1Q8NH59 317 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PTCHD1Q96NR3 888 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 SIGLEC11Q96RL6 698 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PSD2Q9BQI7 771 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 TSSK6Q9BXA6 273 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 ZNF350Q9GZX5 532 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 IFT52Q9Y366 437 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 ALPK2Q86TB3 2170 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 HYAL3O43820 417 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-201ENST00000279247 AGR2O95994 175 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 GRK5P34947 590 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 FNTBP49356 437 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 NDUFAF6Q330K2 333 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 SMARCD3Q6STE5 483 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 HSDL2Q6YN16 418 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 PIGXQ8TBF5 258 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 DGAT2Q96PD7 388 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 OR51E2Q9H255 320 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 CARD8Q9Y2G2 431 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 AIREO43918 545 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 SRPX2O60687 465 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-201ENST00000279247 GABARAPO95166 117 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 SLC35E2P0CK97 266 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 DHPSP49366 369 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-201ENST00000279247 BMXP51813 675 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 BNC1Q01954 994 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 C1orf189Q5VU69 101 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 PRAMEF8Q5VWM4 474 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 PRAMEF7Q5VXH5 474 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 GATSQ8NAP1 163 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 LGALS12Q96DT0 336 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 ATP13A2Q9NQ11 1180 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 PNO1Q9NRX1 252 aaKnown RBP16.66■□□□□ 0.26
CAPN1-201ENST00000279247 PLCXD1Q9NUJ7 323 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 NTMQ9P121 344 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 MRPS33Q9Y291 106 aaKnown RBP16.66■□□□□ 0.26
CAPN1-201ENST00000279247 OR10H1Q9Y4A9 318 aa16.66■□□□□ 0.26
CAPN1-201ENST00000279247 GMFGO60234 142 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 OR2B3O76000 313 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 HTR2AP28223 471 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 TGFBR2P37173 567 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 PCYT1AP49585 367 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 PSG6Q00889 435 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 RELAQ04206 551 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 ZNF91Q05481 1191 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 B3GLCTQ6Y288 498 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 ADCK1Q86TW2 530 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 PFN4Q8NHR9 129 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 CNOT9Q92600 299 aaKnown RBP16.65■□□□□ 0.26
CAPN1-201ENST00000279247 NACC2Q96BF6 587 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 ZHX1-C8orf76Q96EF9 292 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 LMF1Q96S06 567 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 DPH1Q9BZG8 443 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 SAP130Q9H0E3 1048 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 PLCL2Q9UPR0 1127 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 CLDN4O14493 209 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 CDC42EP2O14613 210 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 CLPXO76031 633 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 KCNK2O95069 426 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 MAGEA8P43361 318 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 TSTQ16762 297 aaKnown RBP16.65■□□□□ 0.26
CAPN1-201ENST00000279247 SLC35F3Q8IY50 421 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 OR8J1Q8NGP2 316 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 CHRDQ9H2X0 955 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 EXOSC4Q9NPD3 245 aaKnown RBP16.65■□□□□ 0.26
CAPN1-201ENST00000279247 TBC1D23Q9NUY8 699 aa16.65■□□□□ 0.26
CAPN1-201ENST00000279247 TLCD2A6NGC4 264 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 DBTP11182 482 aaKnown RBP16.64■□□□□ 0.26
CAPN1-201ENST00000279247 SOX3P41225 446 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 ZNF136P52737 540 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 EEF1A1P68104 462 aaKnown RBP16.64■□□□□ 0.26
CAPN1-201ENST00000279247 ZNHIT3Q15649 155 aaPredicted RBP16.64■□□□□ 0.26
CAPN1-201ENST00000279247 TBCEQ15813 527 aaPredicted RBP16.64■□□□□ 0.26
CAPN1-201ENST00000279247 DHRS4L2Q6PKH6 230 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 WDR88Q6ZMY6 472 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 PRR23CQ6ZRP0 262 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 GJD3Q8N144 294 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 SLC15A4Q8N697 577 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 FOLH1BQ9HBA9 442 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 DUSP22Q9NRW4 184 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 CORINQ9Y5Q5 1042 aa16.64■□□□□ 0.26
CAPN1-201ENST00000279247 HEATR5AQ86XA9 2040 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 TECTAO75443 2155 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 EFCAB10A6NFE3 127 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 MPZL2O60487 215 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SLC2A10O95528 541 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 IGKV1D-16P01601 117 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 CD1CP29017 333 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 AFF3P51826 1226 aaKnown RBP16.64■□□□□ 0.25
CAPN1-201ENST00000279247 TMED1Q13445 227 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SLC35F1Q5T1Q4 408 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 UBE2UQ5VVX9 321 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 C12orf73Q69YU5 71 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 PLAG1Q6DJT9 500 aa16.64■□□□□ 0.25
CAPN1-201ENST00000279247 SHISA6Q6ZSJ9 500 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms