RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PPP4R1LQ9P1A2 415 aa8.79□□□□□ -1
VPS41-201ENST00000265745 BAIAP2L1Q9UHR4 511 aa8.79□□□□□ -1
VPS41-201ENST00000265745 MRTO4Q9UKD2 239 aaKnown RBP8.79□□□□□ -1
VPS41-201ENST00000265745 ZNF337Q9Y3M9 751 aa8.79□□□□□ -1
VPS41-201ENST00000265745 DNAJC15Q9Y5T4 150 aa8.79□□□□□ -1
VPS41-201ENST00000265745 EML6Q6ZMW3 1958 aa8.79□□□□□ -1
VPS41-201ENST00000265745 C2CD3Q4AC94 2353 aa8.78□□□□□ -1
VPS41-201ENST00000265745 MED12Q93074 2177 aa8.78□□□□□ -1
VPS41-201ENST00000265745 IGLV3-32A0A0A0MS00 114 aa8.78□□□□□ -1
VPS41-201ENST00000265745 TLDC2A0PJX2 215 aa8.78□□□□□ -1
VPS41-201ENST00000265745 GXYLT2A0PJZ3 443 aa8.78□□□□□ -1
VPS41-201ENST00000265745 LINC01387J3KSC0 135 aa8.78□□□□□ -1
VPS41-201ENST00000265745 LSM1O15116 133 aaKnown RBP8.78□□□□□ -1
VPS41-201ENST00000265745 AKAP10O43572 662 aa8.78□□□□□ -1
VPS41-201ENST00000265745 UTS2O95399 124 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CHEK2O96017 543 aa8.78□□□□□ -1
VPS41-201ENST00000265745 IGKV1D-16P01601 117 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CRHP06850 196 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CHRNGP07510 517 aa8.78□□□□□ -1
VPS41-201ENST00000265745 PRPS2P11908 318 aa8.78□□□□□ -1
VPS41-201ENST00000265745 NEFHP12036 1026 aa8.78□□□□□ -1
VPS41-201ENST00000265745 PEPDP12955 493 aa8.78□□□□□ -1
VPS41-201ENST00000265745 SDC1P18827 310 aa8.78□□□□□ -1
VPS41-201ENST00000265745 HK1P19367 917 aa8.78□□□□□ -1
VPS41-201ENST00000265745 FRKP42685 505 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 CLK3P49761 638 aaKnown RBP8.78□□□□□ -1
VPS41-201ENST00000265745 PSMD4P55036 377 aaKnown RBP8.78□□□□□ -1
VPS41-201ENST00000265745 PRR5P85299 388 aa8.78□□□□□ -1
VPS41-201ENST00000265745 HSPB3Q12988 150 aa8.78□□□□□ -1
VPS41-201ENST00000265745 STX5Q13190 355 aa8.78□□□□□ -1
VPS41-201ENST00000265745 PDE7AQ13946 482 aa8.78□□□□□ -1
VPS41-201ENST00000265745 ARL13AQ5H913 290 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 ANKRD26P1Q6NSI1 321 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CHMP1BQ7LBR1 199 aa8.78□□□□□ -1
VPS41-201ENST00000265745 LUZP2Q86TE4 346 aa8.78□□□□□ -1
VPS41-201ENST00000265745 EXOC3L1Q86VI1 746 aa8.78□□□□□ -1
VPS41-201ENST00000265745 GRAMD2AQ8IUY3 354 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CEP70Q8NHQ1 597 aa8.78□□□□□ -1
VPS41-201ENST00000265745 PIK3R3Q92569 461 aa8.78□□□□□ -1
VPS41-201ENST00000265745 CIDECQ96AQ7 238 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 PPCDCQ96CD2 204 aa8.78□□□□□ -1
VPS41-201ENST00000265745 STARD4Q96DR4 205 aa8.78□□□□□ -1
VPS41-201ENST00000265745 TRIM44Q96DX7 344 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 C1GALT1C1Q96EU7 318 aa8.78□□□□□ -1
VPS41-201ENST00000265745 ZBED6CLQ96FA7 236 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 RMND5BQ96G75 393 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 DACH2Q96NX9 599 aa8.78□□□□□ -1
VPS41-201ENST00000265745 TSSK3Q96PN8 268 aa8.78□□□□□ -1
VPS41-201ENST00000265745 IQCGQ9H095 443 aaKnown RBP8.78□□□□□ -1
VPS41-201ENST00000265745 PTGES2Q9H7Z7 377 aa8.78□□□□□ -1
VPS41-201ENST00000265745 ANKZF1Q9H8Y5 726 aa8.78□□□□□ -1
VPS41-201ENST00000265745 C3orf14Q9HBI5 128 aa8.78□□□□□ -1
VPS41-201ENST00000265745 BRD7Q9NPI1 651 aa8.78□□□□□ -1
VPS41-201ENST00000265745 ACSS1Q9NUB1 689 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 MKS1Q9NXB0 559 aa8.78□□□□□ -1
VPS41-201ENST00000265745 GALNT8Q9NY28 637 aa8.78□□□□□ -1
VPS41-201ENST00000265745 SH3BP4Q9P0V3 963 aa8.78□□□□□ -1
VPS41-201ENST00000265745 MID2Q9UJV3 735 aa8.78□□□□□ -1
VPS41-201ENST00000265745 EDARQ9UNE0 448 aa8.78□□□□□ -1
VPS41-201ENST00000265745 TMED5Q9Y3A6 229 aa8.78□□□□□ -1
VPS41-201ENST00000265745 FIS1Q9Y3D6 152 aa8.78□□□□□ -1
VPS41-201ENST00000265745 TRAF6Q9Y4K3 522 aa8.78□□□□□ -1
VPS41-201ENST00000265745 SETD2Q9BYW2 2564 aaPredicted RBP8.78□□□□□ -1
VPS41-201ENST00000265745 PRRC2AP48634 2157 aaKnown RBP8.78□□□□□ -1
VPS41-201ENST00000265745 ABCA4P78363 2273 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 HCFC1P51610 2035 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 A0A1W2PNV4 684 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 OR2M5A3KFT3 312 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 SLC22A20A6NK97 555 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 TMEM233B4DJY2 109 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 H0YC42 278 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 MSTNO14793 375 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PDPK1O15530 556 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 NKX2-2O95096 273 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GOSR1O95249 250 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 KCNH1O95259 989 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 NUDT17P0C025 328 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 BCKDHAP12694 445 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 DNASE1P24855 282 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 ALDH3A1P30838 453 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 RFX3P48380 749 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 PCYT1AP49585 367 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 SUCLG1P53597 346 aaKnown RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 MANFP55145 182 aaKnown RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 TPD52P55327 224 aaPredicted RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 EEFSECP57772 596 aaKnown RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 C17orf67Q0P5P2 114 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GANABQ14697 944 aaKnown RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 TMEM44Q2T9K0 475 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 GLYR1Q49A26 553 aaPredicted RBP8.77□□□□□ -1.01
VPS41-201ENST00000265745 VPS26BQ4G0F5 336 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 ZNF385BQ569K4 471 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 RAET1LQ5VY80 246 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 OR2A2Q6IF42 318 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 TRABD2AQ86V40 505 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 UBQLNLQ8IYU4 475 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 CDRT4Q8N9R6 151 aa8.77□□□□□ -1.01
VPS41-201ENST00000265745 OR5M1Q8NGP8 315 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms