RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMPRSS11BQ86T26 416 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 TOMM5Q8N4H5 51 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 HDDC3Q8N4P3 179 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 NKAPQ8N5F7 415 aaKnown RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 OR10K1Q8NGX5 313 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 NFKBIDQ8NI38 313 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 VOPP1Q96AW1 172 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 LRR1Q96L50 414 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 SEMA3CQ99985 751 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 MAPKAP1Q9BPZ7 522 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 WDR13Q9H1Z4 485 aa8.23□□□□□ -1.09
VAPB-201ENST00000265619 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 TEX10Q9NXF1 929 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 SIRT4Q9Y6E7 314 aaPredicted RBP8.23□□□□□ -1.09
VAPB-201ENST00000265619 LRIT2A6NDA9 550 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 STK25O00506 426 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RP2O75695 350 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 NTN1O95631 604 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RAB36O95755 333 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GNRH1P01148 92 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PKMP14618 531 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 ANXA7P20073 488 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 SHC1P29353 583 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 CALCRP30988 508 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 FGF9P31371 208 aaPredicted RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 PITPNBP48739 271 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 CASP6P55212 293 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ACTR1AP61163 376 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RGNQ15493 299 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OR2B11Q5JQS5 317 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OR7E24Q6IFN5 339 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ZNF425Q6IV72 752 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 UNQ6494/PRO21346Q6UXR6 183 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 C7orf61Q8IZ16 206 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ZNF485Q8NCK3 441 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 MRPL38Q96DV4 380 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 ZNF582Q96NG8 517 aaPredicted RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 SPATA5L1Q9BVQ7 753 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 ZSCAN32Q9NX65 697 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RASD1Q9Y272 281 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 THSD7BQ9C0I4 1608 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 FXYD6-FXYD2A0A087WZ82 144 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OR2M5A3KFT3 312 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 SYNDIG1LA6NDD5 238 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 AGAP14A8MT82 685 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 HHLA1C9JL84 531 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 M0QZQ0 153 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PRAMEF4O60810 478 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OAZ2O95190 189 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 AGR2O95994 175 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PRF1P14222 555 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 SSTP61278 116 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ZNF155Q12901 538 aaPredicted RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 FZD5Q13467 585 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GK2Q14410 553 aaPredicted RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 HEPACAMQ14CZ8 416 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 XKR6Q5GH73 641 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 EOGTQ5NDL2 527 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PRAMEF9Q5VWM5 478 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 AFMIDQ63HM1 303 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 C12orf73Q69YU5 71 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 CXorf57Q6NSI4 855 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 GSG1LQ6UXU4 331 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PXT1Q8NFP0 134 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OR4F15Q8NGB8 312 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ART5Q96L15 291 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GPA33Q99795 319 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 FXYD6Q9H0Q3 95 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ASH2LQ9UBL3 628 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PHF11Q9UIL8 331 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GSTK1Q9Y2Q3 226 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RPL36Q9Y3U8 105 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 BRWD1Q9NSI6 2320 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 CCDC163A0A0D9SF12 145 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 DISC1C4P0D8 188 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 VEGFDO43915 354 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GJB5O95377 273 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RPLP2P05387 115 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 EBLN1P0CF75 366 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 CRATP43155 626 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 H2BFSP57053 126 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 SEC61A1P61619 476 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 UBE2IP63279 158 aaKnown RBP8.22□□□□□ -1.09
VAPB-201ENST00000265619 RAB33AQ14088 237 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 IFI44LQ53G44 452 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 MARC1Q5VT66 337 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 PLPP4Q5VZY2 271 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 ADNP2Q6IQ32 1131 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 LRRN1Q6UXK5 716 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 FGD2Q7Z6J4 655 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OXR1Q8N573 874 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 OR5M1Q8NGP8 315 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 RPLP0P6Q8NHW5 317 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 GANCQ8TET4 914 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 KCTD13Q8WZ19 329 aa8.22□□□□□ -1.09
VAPB-201ENST00000265619 TSNAXQ99598 290 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms