RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 HMGN2P46Q86SG4 172 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 NAXEQ8NCW5 288 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 OR52E2Q8NGJ4 325 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 L3HYPDHQ96EM0 354 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 PIGMQ9H3S5 423 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 PCTPQ9UKL6 214 aa6.8□□□□□ -1.32
HERC2-201ENST00000261609 FDXRP22570 491 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ZNF791Q3KP31 576 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 LRRC73Q5JTD7 316 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TREML2Q5T2D2 321 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TMEM135Q86UB9 458 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ZNF561Q8N587 486 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 STEAP2Q8NFT2 490 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 GLYATL2Q8WU03 294 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 NINJ1Q92982 152 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ZNF541Q9H0D2 1346 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 MDFIC2A0A1B0GVS7 189 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SLC22A23A1A5C7 686 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 AKAIN1P0CW23 69 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SOX9P48436 509 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ZNF41P51814 821 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 SEMG2Q02383 582 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 INCA1Q0VD86 236 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ADAM5Q6NVV9 412 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TMEM102Q8N9M5 508 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 OR9Q2Q8NGE9 314 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 C2CD4CQ8TF44 421 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 DCLRE1CQ96SD1 692 aaKnown RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 SMIM3Q9BZL3 60 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 RNF13O43567 381 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CRYZQ08257 329 aaKnown RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 WFIKKN2Q8TEU8 576 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SPRYD4Q8WW59 207 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 ADAM19Q9H013 955 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ICKQ9UPZ9 632 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 PCDHAC2Q9Y5I4 1007 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 FMN2Q9NZ56 1722 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SPTBN1Q01082 2364 aaKnown RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 CPED1A4D0V7 1026 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ANKRD28O15084 1053 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 DIRAS3O95661 229 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TYRP14679 529 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CBLP22681 906 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 GCGRP47871 477 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 P2RY14Q15391 338 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CATSPEREQ5SY80 951 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 REM2Q8IYK8 340 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 RNF141Q8WVD5 230 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 LINC01599Q8WXQ3 324 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 NMNAT2Q9BZQ4 307 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TRBV23OR9-2A0A075B6M9 112 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 GRPRP30550 384 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 NFATC2Q13469 925 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SERINC3Q13530 473 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 OR4D1Q15615 310 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CEP68Q76N32 757 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SMIM15Q7Z3B0 74 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 POLDIP3Q9BY77 421 aaKnown RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 ARAFP10398 606 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 GPR143P51810 404 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CYB5R1Q9UHQ9 305 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 OSGIN1Q9UJX0 560 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 C1QBP02746 253 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 BMP1P13497 986 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 KCTD18Q6PI47 426 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 PRSS58Q8IYP2 241 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 RTP4Q96DX8 246 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SUCNR1Q9BXA5 334 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 NDRG3Q9UGV2 375 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SPO11Q9Y5K1 396 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 EOMESO95936 686 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 MLLT11Q13015 90 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CD276Q5ZPR3 534 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 PLPP5Q8NEB5 264 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ZNF578Q96N58 590 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 MEGF11A6BM72 1044 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 P4HA3Q7Z4N8 544 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TMEM150AQ86TG1 271 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SEMA6DQ8NFY4 1073 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 APMAPQ9HDC9 416 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 B3GAT2Q9NPZ5 323 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 GLOD5A6NK44 160 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 TCRBP04435 133 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 ACRV1P26436 265 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SELENBP1Q13228 472 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
HERC2-201ENST00000261609 SLC6A19Q695T7 634 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 PLA2G15Q8NCC3 412 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SMPDL3BQ92485 455 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 RBP7Q96R05 134 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CMKLR1Q99788 373 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 MRI1Q9BV20 369 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 KIF25Q9UIL4 384 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 DNAJC15Q9Y5T4 150 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 SPNP16150 400 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 CLRN1P58418 232 aa6.79□□□□□ -1.32
HERC2-201ENST00000261609 COX15Q7KZN9 410 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms