RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PPP1R3DO95685 299 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 PIGRP01833 764 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 HOXB5P09067 269 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 PGCP20142 388 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 ERVK-16P61578 105 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 SP3Q02447 781 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 MAP4K2Q12851 820 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 Q6ZVL8 140 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 CD163Q86VB7 1156 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-201ENST00000240185 DAZAP1Q96EP5 407 aaKnown RBP13.13□□□□□ -0.31
TARDBP-201ENST00000240185 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 ATRNO75882 1429 aa13.13□□□□□ -0.31
TARDBP-201ENST00000240185 PRSS44E7EML9 344 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 NRP1O14786 923 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SCAF4O95104 1147 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ZNF33BQ06732 778 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 DOC2AQ14183 400 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 HMGN3Q15651 99 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SULF2Q8IWU5 870 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ADAM19Q9H013 955 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PCDHGA5Q9Y5G8 931 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CATSPEREQ5SY80 951 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 C18orf63Q68DL7 685 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 TMEM125Q96AQ2 219 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 NPY6RQ99463 290 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SLAMF7Q9NQ25 335 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PURGQ9UJV8 347 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 INHAP05111 366 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SH3BP2P78314 561 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 Q8N9G6 341 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 AVL9Q8NBF6 648 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 OR56B4Q8NH76 319 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ECHDC3Q96DC8 303 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PAPOLGQ9BWT3 736 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ASB3Q9Y575 518 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 FAM171A2A8MVW0 826 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PEX14O75381 377 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 EOMESO95936 686 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 S1PR4O95977 384 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 AK1P00568 194 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 NFYAP23511 347 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ARHGAP1Q07960 439 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 DEFB134Q4QY38 66 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 C22orf39Q6P5X5 142 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 METTL27Q8N6F8 245 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CRB3Q9BUF7 120 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ABRACLQ9P1F3 81 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SERTAD3Q9UJW9 196 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 MYO5BQ9ULV0 1848 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 PEX12O00623 359 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SLC16A5O15375 505 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 MGST1P10620 155 aaKnown RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ARSBP15848 533 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 HABP2Q14520 560 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-201ENST00000240185 P2RY14Q15391 338 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 GTDC1Q4AE62 458 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 APOOLQ6UXV4 268 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 ZNF75AQ96N20 296 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 TRIB3Q96RU7 358 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 CNIH4Q9P003 139 aa13.12□□□□□ -0.31
TARDBP-201ENST00000240185 MST1RQ04912 1400 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 WASH4PA8MWX3 477 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 NUDT1P36639 197 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 GMPRP36959 345 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 PHF19Q5T6S3 580 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 FCRLBQ6BAA4 426 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 USP50Q70EL3 339 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-201ENST00000240185 MCATQ8IVS2 390 aaKnown RBP13.11□□□□□ -0.31
TARDBP-201ENST00000240185 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 PRR18Q8N4B5 295 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 DUSP19Q8WTR2 217 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
TARDBP-201ENST00000240185 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 TP53I11O14683 189 aa13.11□□□□□ -0.31
TARDBP-201ENST00000240185 FABP7O15540 132 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms