RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 GANCQ8TET4 914 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 TMEM255BQ8WV15 326 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 MS4A4EQ96PG1 132 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 RPRD1BQ9NQG5 326 aaKnown RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 THAP10Q9P2Z0 257 aaPredicted RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 ZNF443Q9Y2A4 671 aaPredicted RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 ANTXRLA6NF34 631 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 PRR19A6NJB7 356 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CD8B2A6NJW9 211 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FCMRO60667 390 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CD8BP10966 210 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 GCGRP47871 477 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 GZMKP49863 264 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 EFR3AQ14156 821 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FRRS1Q6ZNA5 592 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 KLBQ86Z14 1044 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CPOQ8IVL8 374 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 ACBD7Q8N6N7 88 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 SIRT6Q8N6T7 355 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 CREB3L1Q96BA8 519 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 SLC35A4Q96G79 324 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 UBQLN3Q9H347 655 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 FN3KQ9H479 309 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 RMI1Q9H9A7 625 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 IL23AQ9NPF7 189 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 HINT3Q9NQE9 182 aaKnown RBP12.42□□□□□ -0.42
SRP54-201ENST00000216774 NLKQ9UBE8 527 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 DPP7Q9UHL4 492 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 CSNK1G3Q9Y6M4 447 aa12.42□□□□□ -0.42
SRP54-201ENST00000216774 TBC1D3KA0A087X1G2 549 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 TBC1D3FA6NER0 549 aaPredicted RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 GTPBP1O00178 669 aaKnown RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 RNF13O43567 381 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 PIP5K1CO60331 668 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 ASGR2P07307 311 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CMPK1P30085 196 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 RAB8AP61006 207 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CLPPQ16740 277 aaPredicted RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 FAM78AQ5JUQ0 283 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SNAP47Q5SQN1 464 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 TBC1D3GQ6DHY5 549 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 MFSD12Q6NUT3 480 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CDC73Q6P1J9 531 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SMARCD3Q6STE5 483 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 PAMR1Q6UXH9 720 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 NANOGNBQ7Z5D8 188 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 KAT2AQ92830 837 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 KCTD12Q96CX2 325 aaKnown RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 SAMD8Q96LT4 415 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 APOBEC3BQ9UH17 382 aaKnown RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 NTNG1Q9Y2I2 539 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CLCA3PQ9Y6N3 262 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 C2orf92A0A1B0GVN3 265 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SOCS6O14544 535 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 ARHGEF9O43307 516 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SLC2A10O95528 541 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 CD53P19397 219 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 PAICSP22234 425 aaKnown RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 RAB25P57735 213 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 RRAS2P62070 204 aaPredicted RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 LRRC32Q14392 662 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 INSL4Q14641 139 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 HBMQ6B0K9 141 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 ZNF425Q6IV72 752 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SYCE2Q6PIF2 218 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SAMD14Q8IZD0 417 aaPredicted RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 JPH3Q8WXH2 748 aaPredicted RBP12.41□□□□□ -0.42
SRP54-201ENST00000216774 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 PTGFRNQ9P2B2 879 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
SRP54-201ENST00000216774 OR52A4PA6NMU1 304 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ISM1B1AKI9 464 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 MID1O15344 667 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 LATO43561 262 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 THBS1P07996 1170 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ARSBP15848 533 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 PRKCAP17252 672 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ELK1P19419 428 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 F8A1P23610 371 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 PEBP1P30086 187 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 CTBP2P56545 445 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 GNG2P59768 71 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 GALK2Q01415 458 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 PDGFRLQ15198 375 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 LTB4RQ15722 352 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 NIPAL3Q6P499 406 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 LRRC28Q86X40 367 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms