RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ANKFN1Q8N957 763 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 BBS10Q8TAM1 723 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 TMEM19Q96HH6 336 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 ANGPTL4Q9BY76 406 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 MKLN1Q9UL63 735 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 BOKQ9UMX3 212 aaPredicted RBP18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 ATRXP46100 2492 aa18.51■□□□□ 0.55
RHBDD3-201ENST00000216085 A0A0G2JPF8 293 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HNRNPCL2B2RXH8 293 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HNRNPCL3B7ZW38 293 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 PEX1O43933 1283 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HNRNPCL1O60812 293 aaKnown RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 RASAL1O95294 804 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HNRNPCL4P0DMR1 293 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ENDOUP21128 410 aaKnown RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 SCARB2Q14108 478 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 INTS11Q5TA45 600 aaKnown RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 TYW3Q6IPR3 259 aaKnown RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 REEP3Q6NUK4 255 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 C8orf82Q6P1X6 216 aaPredicted RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 KRT73Q86Y46 540 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 POGLUT1Q8NBL1 392 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 GRHL3Q8TE85 626 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 MAL2Q969L2 176 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 REXO5Q96IC2 774 aaKnown RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ZNF597Q96LX8 424 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HES7Q9BYE0 225 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 MTHFD2LQ9H903 347 aaPredicted RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 FBXO34Q9NWN3 711 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ZFYVE26Q68DK2 2539 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 SCO2O43819 266 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 OXSR1O95747 527 aaPredicted RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 GPR85P60893 370 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 FRRS1Q6ZNA5 592 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 NET1Q7Z628 596 aaPredicted RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 MISPQ8IVT2 679 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 SULF2Q8IWU5 870 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 SLC15A3Q8IY34 581 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 PEX5LQ8IYB4 626 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ZNF614Q8N883 585 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 HIPK4Q8NE63 616 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 TNIP2Q8NFZ5 429 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 NFKBIDQ8NI38 313 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 TREX2Q9BQ50 279 aaPredicted RBP18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 SAP130Q9H0E3 1048 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ADA2Q9NZK5 511 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 B4GALT7Q9UBV7 327 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 ANAPC2Q9UJX6 822 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 WIF1Q9Y5W5 379 aa18.5■□□□□ 0.55
RHBDD3-201ENST00000216085 A0A1W2PQD3 144 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 FAM220BPB1ANY3 271 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ALG1L2C9J202 215 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ACOT7O00154 380 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 FCMRO60667 390 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ATP5HO75947 161 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 CHRM4P08173 479 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 MEOX1P50221 254 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 RASSF2P50749 326 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 CHRNEQ04844 493 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 PLEKHN1Q494U1 663 aaPredicted RBP18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 DESI1Q6ICB0 168 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ZAR1Q86SH2 424 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 PTRH1Q86Y79 214 aaKnown RBP18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 OR2T12Q8NG77 320 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 OR2M7Q8NG81 312 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 OR4C3Q8NH37 302 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 SLC39A7Q92504 469 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 SPATA5L1Q9BVQ7 753 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 SLC38A1Q9H2H9 487 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ALG2Q9H553 416 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 ABCD2Q9UBJ2 740 aa18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 SUCOQ9UBS9 1254 aaKnown RBP18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.49■□□□□ 0.55
RHBDD3-201ENST00000216085 PRAMEF27A3QJZ7 478 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 G3V3Y1 287 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 NDUFB5O43674 189 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 FADS1O60427 444 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 PDE9AO76083 593 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 ELAVL4P26378 380 aaKnown RBP18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 DNASE1L1P49184 302 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 EEFSECP57772 596 aaKnown RBP18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 SLC25A3Q00325 362 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 PLGLB1Q02325 96 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 NFATC3Q12968 1075 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 DEFB107AQ8IZN7 70 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 C10orf111Q8N326 155 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 TMEM41AQ96HV5 264 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 JSRP1Q96MG2 331 aaPredicted RBP18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 ZNF607Q96SK3 696 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 C1orf21Q9H246 121 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 PIF1Q9H611 641 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 BCL2L10Q9HD36 194 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 CMTM6Q9NX76 183 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 PPP4R1LQ9P1A2 415 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 DTNAQ9Y4J8 743 aa18.48■□□□□ 0.55
RHBDD3-201ENST00000216085 EBAG9O00559 213 aa18.47■□□□□ 0.55
RHBDD3-201ENST00000216085 DBIP07108 87 aaKnown RBP18.47■□□□□ 0.55
RHBDD3-201ENST00000216085 PCGF2P35227 344 aa18.47■□□□□ 0.55
RHBDD3-201ENST00000216085 LIPEQ05469 1076 aa18.47■□□□□ 0.55
RHBDD3-201ENST00000216085 ZNF141Q15928 474 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms