RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 EDAQ92838 391 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 MPP4Q96JB8 637 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 GPA33Q99795 319 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 RHNO1Q9BSD3 238 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 COPS4Q9BT78 406 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 NDC1Q9BTX1 674 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PRR14Q9BWN1 585 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC25A19Q9HC21 320 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 C14orf105Q9NVL8 296 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 CLN6Q9NWW5 311 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PRODH2Q9UF12 536 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 TESQ9UGI8 421 aaKnown RBP13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 U3KQA8 63 aa13.27□□□□□ -0.28
RTFDC1-201ENST00000023939 PRUNE2Q8WUY3 3088 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 TRAPPC13A5PLN9 417 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CLDN24A6NM45 220 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 NPIPB9F8W1W9 429 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 HRKO00198 91 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 PEX12O00623 359 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 KLF4O43474 513 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 INMTO95050 263 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CLPSP04118 112 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CDK1P06493 297 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 PIPP12273 146 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 FPR3P25089 353 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 POU1F1P28069 291 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 PSMD4P55036 377 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CDK5Q00535 292 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 ROR2Q01974 943 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 FOXD4Q12950 439 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 SRSF5Q13243 272 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 TBCEQ15813 527 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 UBE2UQ5VVX9 321 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF730Q6ZMV8 503 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 MBOAT2Q6ZWT7 520 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 MRGPREQ86SM8 312 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 OR8J1Q8NGP2 316 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 Q96MT0 163 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 G6PC3Q9BUM1 346 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 OR10A5Q9H207 317 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 GPN2Q9H9Y4 310 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 Q9N2J8 555 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CTPS2Q9NRF8 586 aa13.27□□□□□ -0.29
RTFDC1-201ENST00000023939 CACNA1EQ15878 2313 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 EFCAB10A6NFE3 127 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 H3BN98 237 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 NOL3O60936 208 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 LYPD3O95274 346 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 SOX14O95416 240 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 CT45A8P0DMV1 189 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 CT45A9P0DMV2 189 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 MYF5P13349 255 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 STAT5AP42229 794 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC15A1P46059 708 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 GIPRP48546 466 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 EFNB1P98172 346 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 OCLNQ16625 522 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 HLA-BQ31612 363 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 FLYWCH1Q4VC44 716 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 CT45A2Q5DJT8 189 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 CASP12Q6UXS9 341 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 NPSR1Q6W5P4 371 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 PRICKLE2Q7Z3G6 844 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 ANKRD13BQ86YJ7 626 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 CMIPQ8IY22 773 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 RNF113BQ8IZP6 322 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 C16orf52Q8NHV5 167 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC6A14Q9UN76 642 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 ERVK-19Q9WJR5 959 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 MAU2Q9Y6X3 613 aa13.26□□□□□ -0.29
RTFDC1-201ENST00000023939 SCN2AQ99250 2005 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 A0A1B0GX78 115 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 SYNDIG1LA6NDD5 238 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ENO4A6NNW6 628 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 IGKV1D-16P01601 117 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 IFNA16P05015 189 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 HTR2AP28223 471 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 MAP2K4P45985 399 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 HOXC5Q00444 222 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PLAURQ03405 335 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 CSTF1Q05048 431 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 IRF3Q14653 427 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 SNAP47Q5SQN1 464 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF613Q6PF04 617 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 RRM2BQ7LG56 351 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 GATAD2AQ86YP4 633 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 NKAIN4Q8IVV8 208 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 C1orf210Q8IVY1 113 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 FAM26EQ8N5C1 309 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms