RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 INPP5KQ9BT40 448 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 C1orf43Q9BWL3 253 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 MAK16Q9BXY0 300 aaKnown RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 KLC2Q9H0B6 622 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 OR52A5Q9H2C5 316 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 VPS37BQ9H9H4 285 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 COPS7BQ9H9Q2 264 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 MYNNQ9NPC7 610 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 TREX1Q9NSU2 369 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 PANK4Q9NVE7 773 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 INTS10Q9NVR2 710 aaKnown RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ERVK13-1Q9NX77 482 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 COX16Q9P0S2 106 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 DTX4Q9Y2E6 619 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 EFCAB8A8MWE9 144 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 H0YL77 283 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 STX16-NPEPL1H3BU86 382 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 STX16O14662 325 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ABCD4O14678 606 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 HOXA3O43365 443 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ADAM20O43506 726 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 PLPP2O43688 288 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 RFPL3SP0C7P2 107 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF888P0CJ79 500 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 RPS2P15880 293 aaKnown RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 PECAM1P16284 738 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF708P17019 499 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 GPD1P21695 349 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 IL32P24001 234 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 CASP4P49662 377 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 HEPACAMQ14CZ8 416 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 RPS6KA2Q15349 733 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 TAB1Q15750 504 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF791Q3KP31 576 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 C2orf76Q3KRA6 126 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 TIMM23BQ5SRD1 257 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 RWDD4Q6NW29 188 aaKnown RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 AAGABQ6PD74 315 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 FBXL13Q8NEE6 735 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 OR51Q1Q8NH59 317 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 GSDMBQ8TAX9 411 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 HMGCLL1Q8TB92 370 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 GRK7Q8WTQ7 553 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 TFAP2BQ92481 460 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 PTP4A1Q93096 173 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 SPSB4Q96A44 273 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 GMPPAQ96IJ6 420 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ITCHQ96J02 903 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 G6PC3Q9BUM1 346 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 VPS16Q9H269 839 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 LANCL2Q9NS86 450 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 ANAPC5Q9UJX4 755 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 FBXW2Q9UKT8 454 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 SNX10Q9Y5X0 201 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 DNAH2Q9P225 4427 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 CSMD3Q7Z407 3707 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
CCDC7-213ENST00000639290 A0A087WWL8 130 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 IGKV3D-11A0A0A0MRZ8 115 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TMEM82A0PJX8 343 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 OR2A25A4D2G3 310 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 EPM2AB3EWF7 344 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PRKNO60260 465 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MPZL1O95297 269 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 BMP15O95972 392 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SNRNP70P08621 437 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CCL3P10147 92 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PKMP14618 531 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CPA1P15085 419 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MAPK3P27361 379 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PEBP1P30086 187 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 AKT1P31749 480 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 BSGP35613 385 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ME1P48163 572 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF135P52742 658 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SLC37A1P57057 533 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CORO7P57737 925 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 POU6F2P78424 691 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 HMGN5P82970 282 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MXRA7P84157 204 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TNFRSF17Q02223 184 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PDCLQ13371 301 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CCNIQ14094 377 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SLC29A2Q14542 456 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 LARS2Q15031 903 aaKnown RBP2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RPS6KA1Q15418 735 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 MST1LQ2TV78 715 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 HFEQ30201 348 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 C1orf220Q5T0J3 134 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SLC2A7Q6PXP3 512 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 TMEM220Q6QAJ8 160 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 PET117Q6UWS5 81 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CHMP1BQ7LBR1 199 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 SLC46A3Q7Z3Q1 461 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 C10orf53Q8N6V4 93 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 CSNK1A1LQ8N752 337 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 OR2L8Q8NGY9 312 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 VPS33AQ96AX1 596 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 ULK4Q96C45 1275 aa2.97□□□□□ -1.93
CCDC7-213ENST00000639290 RBM18Q96H35 190 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms