RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PLEKHM1Q9Y4G2 1056 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM218A2RU14 115 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 DRGXA6NNA5 263 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 C5orf58C9J3I9 102 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 SCAMP2O15127 329 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 GPR182O15218 404 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 PCDH7O60245 1069 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 RGS9O75916 674 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 LRATO95237 230 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 OPN1SWP03999 348 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 IFNW1P05000 195 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 GP1BAP07359 652 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 CNR1P21554 472 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 FEN1P39748 380 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 EIF2S3P41091 472 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 MVDP53602 400 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 PSMA6P60900 246 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 SCARB2Q14108 478 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 ZSWIM7Q19AV6 140 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 FAM74A1Q5RGS3 127 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 EEF1A1P5Q5VTE0 462 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 PRAMEF13Q5VWM6 474 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF626Q68DY1 528 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 OR5M10Q6IEU7 315 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 ADGRG2Q8IZP9 1017 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 NAGSQ8N159 534 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 OXR1Q8N573 874 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 JAM3Q9BX67 310 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 SPATC1LQ9H0A9 340 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 PDFQ9HBH1 243 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 GOLGA2P5Q9HBQ8 144 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 GPN1Q9HCN4 374 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-221ENST00000638141 SLC22A11Q9NSA0 550 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 TAS2R5Q9NYW4 299 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 FKBPLQ9UIM3 349 aa11.29□□□□□ -0.6
CAPN3-221ENST00000638141 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 LRRTM2O43300 516 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TLX2O43763 284 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 STX11O75558 287 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 ANXA5P08758 320 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SFTPCP11686 197 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 HOXA6P31267 233 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 DGKGP49619 791 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 P2RY4P51582 365 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SMIM11AP58511 58 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 LRRN1Q6UXK5 716 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 FAM122BQ7Z309 247 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SERPINA12Q8IW75 414 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 LINC00471Q8N535 108 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 OR52N2Q8NGI0 321 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 APIPQ96GX9 242 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 LRR1Q96L50 414 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TCF7L1Q9HCS4 588 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 MTMR11A4FU01 709 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 H3BN98 237 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 GFYI3L273 518 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 GPR31O00270 319 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 RNASET2O00584 256 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 MID1O15344 667 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 ARPC5O15511 151 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CLN5O75503 358 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 POP7O75817 140 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SERPIND1P05546 499 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 PIRTP0C851 137 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CBSLP0DN79 551 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 HSD3B1P14060 373 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 MGMTP16455 207 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF7P17097 686 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TYRP1P17643 537 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CD53P19397 219 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CBSP35520 551 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SLC1A3P43003 542 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TM4SF4P48230 202 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CDKN1CP49918 316 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CAPZA1P52907 286 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 STARD6P59095 220 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 ACTR1AP61163 376 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM44Q2T9K0 475 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SLC36A4Q6YBV0 504 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 MRGPREQ86SM8 312 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SMIM4Q8WVI0 70 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 APOBEC4Q8WW27 367 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 APOLD1Q96LR9 279 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms