RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ARL9Q6T311 187 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 DHRS1Q96LJ7 313 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 HINT3Q9NQE9 182 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 A0A0G2JMP0 313 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 A0A0X1KG70 313 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 TIMP1P01033 207 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 CHRNB1P11230 501 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 DRD3P35462 400 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ACVR1BP36896 505 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 GCGRP47871 477 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 DPTQ07507 201 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC3A1Q07837 685 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 CDK10Q15131 360 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 LCN1P1Q5VSP4 162 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 GDPGP1Q6ZNW5 385 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 OR10H4Q8NGA5 316 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 OR4M2Q8NGB6 313 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 TOX2Q96NM4 488 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 PPIL3Q9H2H8 161 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 BEX1Q9HBH7 125 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 WASH6PQ9NQA3 447 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 WSB2Q9NYS7 404 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 MARK1Q9P0L2 795 aa13.13□□□□□ -0.31
CACNA1A-228ENST00000636610 A0A0B4J203 849 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 LANCL1O43813 399 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 EML2O95834 649 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 RPN2P04844 631 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 MAP2K3P46734 347 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 RAB28P51157 221 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 HCCSP53701 268 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 COX10Q12887 443 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 VITQ6UXI7 678 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ETFBKMTQ8IXQ9 262 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 DACT3Q96B18 629 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 SLC35A4Q96G79 324 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 PRDM7Q9NQW5 492 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 NDOR1Q9UHB4 597 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 MN1Q10571 1320 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 HMX3A6NHT5 357 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 C12orf71A8MTZ7 269 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 GRXCR1A8MXD5 290 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 SERPINI2O75830 405 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 CPN2P22792 545 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 RAB40BQ12829 278 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 C2orf27AQ580R0 203 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 TIGD4Q8IY51 512 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 OR13C5Q8NGS8 318 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 RELTQ969Z4 430 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 C20orf141Q9NUB4 165 aa13.12□□□□□ -0.31
CACNA1A-228ENST00000636610 E9PI62 339 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 LDB3O75112 727 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ACADMP11310 421 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 SHC1P29353 583 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 TRAM2Q15035 370 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 FIGNL1Q6PIW4 674 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 PCNPQ8WW12 178 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 ELP4Q96EB1 424 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 COX14Q96I36 57 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 MSLNLQ96KJ4 702 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 TNFRSF10DQ9UBN6 386 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 GRIP1Q9Y3R0 1128 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 C1QTNF3-AMACRE9PGA6 284 aa13.11□□□□□ -0.31
CACNA1A-228ENST00000636610 H0Y8X5 98 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms