RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 JSRP1Q96MG2 331 aaPredicted RBP18.57■□□□□ 0.56
PTCD3-220ENST00000627371 ELAC2Q9BQ52 826 aaKnown RBP18.57■□□□□ 0.56
PTCD3-220ENST00000627371 PAIP1Q9H074 479 aaKnown RBP18.57■□□□□ 0.56
PTCD3-220ENST00000627371 ZNF703Q9H7S9 590 aaPredicted RBP18.57■□□□□ 0.56
PTCD3-220ENST00000627371 ZDHHC11Q9H8X9 412 aa18.57■□□□□ 0.56
PTCD3-220ENST00000627371 NPIPA1Q9UND3 350 aa18.57■□□□□ 0.56
PTCD3-220ENST00000627371 WIF1Q9Y5W5 379 aa18.57■□□□□ 0.56
PTCD3-220ENST00000627371 POLEQ07864 2286 aa18.57■□□□□ 0.56
PTCD3-220ENST00000627371 ANKUB1A6NFN9 424 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 PYCARD-AS1I3L0S3 204 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 SNPHO15079 494 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 FADS1O60427 444 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 WISP2O76076 250 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 KRT75O95678 551 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 AK1P00568 194 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 HOXB9P17482 250 aaPredicted RBP18.56■□□□□ 0.56
PTCD3-220ENST00000627371 ELAVL4P26378 380 aaKnown RBP18.56■□□□□ 0.56
PTCD3-220ENST00000627371 GAS1P54826 345 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 UBAP2LQ14157 1087 aaKnown RBP18.56■□□□□ 0.56
PTCD3-220ENST00000627371 GTDC1Q4AE62 458 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 KRTCAP3Q53RY4 240 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 CMPK2Q5EBM0 449 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 PAGE3Q5JUK9 113 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 LRIF1Q5T3J3 769 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 ZAR1Q86SH2 424 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 FAM109AQ8N4B1 249 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 CHDHQ8NE62 594 aaPredicted RBP18.56■□□□□ 0.56
PTCD3-220ENST00000627371 OR52N2Q8NGI0 321 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 FAM107BQ9H098 131 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 EXD2Q9NVH0 621 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 FBXO34Q9NWN3 711 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 B4GALT7Q9UBV7 327 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 SEC14L3Q9UDX4 400 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 PCDHB14Q9Y5E9 798 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 PCNX3Q9H6A9 2034 aa18.56■□□□□ 0.56
PTCD3-220ENST00000627371 ADAM10O14672 748 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 NGFRP08138 427 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 OR12D1P0DN82 309 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 ATP6V1C1P21283 382 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 ADSLP30566 484 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-220ENST00000627371 MAGEA5P43359 124 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 MAGEA8P43361 318 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 ANXA11P50995 505 aaKnown RBP18.55■□□□□ 0.56
PTCD3-220ENST00000627371 MRPL49Q13405 166 aaKnown RBP18.55■□□□□ 0.56
PTCD3-220ENST00000627371 GRAMD1BQ3KR37 738 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 ARHGAP11BQ3KRB8 267 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 TIGD3Q6B0B8 471 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 HEPHL1Q6MZM0 1159 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 GFRALQ6UXV0 394 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 CPLX4Q7Z7G2 160 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 PNPT1Q8TCS8 783 aaKnown RBP18.55■□□□□ 0.56
PTCD3-220ENST00000627371 SDF2Q99470 211 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 NMUR2Q9GZQ4 415 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 TPT1P8Q9HAU6 139 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 QPCTLQ9NXS2 382 aa18.55■□□□□ 0.56
PTCD3-220ENST00000627371 LEF1Q9UJU2 399 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-220ENST00000627371 FASNP49327 2511 aaKnown RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 C2orf72A6NCS6 295 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 HMGN4O00479 90 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 GNB5O14775 395 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 ANGPT2O15123 496 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 SCO2O43819 266 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 SNX3O60493 162 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 UNC5CO95185 931 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 SNRPB2P08579 225 aaKnown RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 RFPL3SP0C7P2 107 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 TBXA2RP21731 343 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 GNLYP22749 145 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 UQCRFS1P47985 274 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 CLK3P49761 638 aaKnown RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 MVDP53602 400 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 KLF10Q13118 480 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 ELOAQ14241 798 aaKnown RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 ATAD3BQ5T9A4 648 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 C16orf62Q7Z3J2 963 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 GHDCQ8N2G8 530 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 OR1J4Q8NGS1 313 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 XAGE5Q8WWM1 108 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 RAB8BQ92930 207 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 AURKBQ96GD4 344 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 UBQLN3Q9H347 655 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 UBQLN4Q9NRR5 601 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 PLSCR2Q9NRY7 297 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 SLAMF8Q9P0V8 285 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 C15orf41Q9Y2V0 281 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 NDUFAF1Q9Y375 327 aa18.54■□□□□ 0.56
PTCD3-220ENST00000627371 HELZ2Q9BYK8 2649 aaKnown RBP18.54■□□□□ 0.56
PTCD3-220ENST00000627371 MYO18BQ8IUG5 2567 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 TRBV5-3A0A0A0MS03 114 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 SLC22A2O15244 555 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 UBR5O95071 2799 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-220ENST00000627371 WISP1O95388 367 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 OXSR1O95747 527 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-220ENST00000627371 FUT5Q11128 374 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 COX20Q5RI15 118 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 DPP10Q8N608 796 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 WDSUB1Q8N9V3 476 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 OR4C3Q8NH37 302 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 GNRHR2Q96P88 292 aa18.53■□□□□ 0.56
PTCD3-220ENST00000627371 TBL1XR1Q9BZK7 514 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms