RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 OR1C1Q15619 314 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 RPS26P11Q5JNZ5 115 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 OVCH1Q7RTY7 1134 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 ADCK1Q86TW2 530 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 BOLLQ8N9W6 283 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 L3MBTL4Q8NA19 623 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 OR5M9Q8NGP3 310 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 THEM6Q8WUY1 208 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SGTBQ96EQ0 304 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 INPP5KQ9BT40 448 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 BTBD2Q9BX70 525 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 GPR87Q9BY21 358 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CLK4Q9HAZ1 481 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 EMC3Q9P0I2 261 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 PCOLCE2Q9UKZ9 415 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM5Q9Y2B1 443 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 OR7A17O14581 309 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ANKRD28O15084 1053 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 OR2T1O43869 369 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PPM1BO75688 479 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 OR5F1O95221 314 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 FGF4P08620 206 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF3P17036 446 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 CD82P27701 267 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ECHS1P30084 290 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 GTF2A1P52655 376 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 GALNT1Q10472 559 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PTGES3Q15185 160 aaKnown RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SLC48A1Q6P1K1 146 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PAQR7Q86WK9 346 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF540Q8NDQ6 660 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 EXTL1Q92935 676 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 COQ8BQ96D53 544 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF578Q96N58 590 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SGPP1Q9BX95 441 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 EBF2Q9HAK2 575 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 LYRM4Q9HD34 91 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 MKS1Q9NXB0 559 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ING3Q9NXR8 418 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PCNX1Q96RV3 2341 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 HMGN1P05114 100 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 STAT5AP42229 794 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 KCNJ10P78508 379 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PON3Q15166 354 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 NKG7Q16617 165 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ADNP2Q6IQ32 1131 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF619Q8N2I2 560 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 NSMAFQ92636 917 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 PMM1Q92871 262 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ALPK1Q96QP1 1244 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 NRTNQ99748 197 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 MUC13Q9H3R2 512 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 CLEC4AQ9UMR7 237 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 EDARQ9UNE0 448 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SLC35A3Q9Y2D2 325 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 hCG_1807616A0A1W2PRN6 198 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 H3BSH0 61 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SOCS2O14508 198 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF264O43296 627 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 GPIP06744 558 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 SLC6A6P31641 620 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 KDELR2P33947 212 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 NHLH1Q02575 133 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 MFSD13AQ14CX5 517 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 TRMT12Q53H54 448 aaKnown RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF766Q5HY98 468 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 RHBDD2Q6NTF9 364 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 OR2Y1Q8NGV0 311 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 CAPSLQ8WWF8 208 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 ERMAPQ96PL5 475 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 IL4I1Q96RQ9 567 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 C12orf49Q9H741 205 aa8.47□□□□□ -1.05
HDAC9-229ENST00000622668 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM184BQ9Y519 407 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-229ENST00000622668 A0A0G2JPF8 293 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 HNRNPCL3B7ZW38 293 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 HNRNPCL4P0DMR1 293 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 S100A5P33763 92 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 GGT2P36268 569 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 TSFMP43897 325 aaKnown RBP8.46□□□□□ -1.05
HDAC9-229ENST00000622668 HBA1P69905 142 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 IL10RAQ13651 578 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 LAPTM4AQ15012 233 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ACER2Q5QJU3 275 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 SLC25A25Q6KCM7 469 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 CYHR1Q6ZMK1 362 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 C3P1Q6ZMU1 363 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ASCL5Q7RTU5 278 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF283Q8N7M2 679 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 LINC01555Q8NAE3 123 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ZBTB44Q8NCP5 570 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 CA5BP1Q8WTZ4 195 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ANKRD27Q96NW4 1050 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 OR7D2Q96RA2 312 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 MED18Q9BUE0 208 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 VN1R1Q9GZP7 353 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms