RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DCST2Q5T1A1 773 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 HEPHL1Q6MZM0 1159 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 DLEU7Q6UYE1 221 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 OLIG3Q7RTU3 272 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 TMEM251Q8N6I4 163 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 CHDHQ8NE62 594 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-217ENST00000621474 RAB8BQ92930 207 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 TMEM41AQ96HV5 264 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 OSBPL11Q9BXB4 747 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 ZNF703Q9H7S9 590 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-217ENST00000621474 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 ZDHHC11Q9H8X9 412 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 IL1RL2Q9HB29 575 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 VAPAQ9P0L0 249 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 ARMCX1Q9P291 453 aa13.09□□□□□ -0.31
CBWD3-217ENST00000621474 A0A096LPI6 279 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 FAM166BA8MTA8 275 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 ASNA1O43681 348 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 UNC5CO95185 931 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 SNX4O95219 450 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 UTS2O95399 124 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 KRT16P08779 473 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 CELA3AP09093 270 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 MAGEA5P43359 124 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 PSMD4P55036 377 aaKnown RBP13.08□□□□□ -0.32
CBWD3-217ENST00000621474 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.32
CBWD3-217ENST00000621474 MRPL49Q13405 166 aaKnown RBP13.08□□□□□ -0.32
CBWD3-217ENST00000621474 GRAMD1BQ3KR37 738 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 SLC30A6Q6NXT4 461 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 PIGWQ7Z7B1 504 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 CHERPQ8IWX8 916 aaKnown RBP13.08□□□□□ -0.32
CBWD3-217ENST00000621474 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 TSPEARQ8WU66 669 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 SDF2Q99470 211 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 KLRF1Q9NZS2 232 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 MRTO4Q9UKD2 239 aaKnown RBP13.08□□□□□ -0.32
CBWD3-217ENST00000621474 WIF1Q9Y5W5 379 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 HEATR5AQ86XA9 2040 aa13.08□□□□□ -0.32
CBWD3-217ENST00000621474 DUXAA6NLW8 204 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPA5E9PKD4 350 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPB9F8W1W9 429 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 SNPHO15079 494 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 FCMRO60667 390 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ANP32DO95626 131 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 OXSR1O95747 527 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 SNRPB2P08579 225 aaKnown RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 EDN3P14138 238 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 MAPK11Q15759 364 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 AP1ARQ63HQ0 302 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 DPP10Q8N608 796 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 GALNT11Q8NCW6 608 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ST6GALNAC3Q8NDV1 305 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 JSRP1Q96MG2 331 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 GPR137Q96N19 417 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 GNRHR2Q96P88 292 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 KCNE5Q9UJ90 142 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 LEF1Q9UJU2 399 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPA1Q9UND3 350 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 ABCG2Q9UNQ0 655 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 GMEB1Q9Y692 573 aa13.07□□□□□ -0.32
CBWD3-217ENST00000621474 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 CENPVL1A0A0U1RR11 272 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 CLIC1O00299 241 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 TFECO14948 347 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-217ENST00000621474 ZNHIT1O43257 154 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 SOX30O94993 753 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 NGFRP08138 427 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 PPIAP62937 165 aaKnown RBP13.06□□□□□ -0.32
CBWD3-217ENST00000621474 HSF1Q00613 529 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 TIGD3Q6B0B8 471 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 FGD2Q7Z6J4 655 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 PACS2Q86VP3 889 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 XAGE5Q8WWM1 108 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 G6PC3Q9BUM1 346 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 CCDC106Q9BWC9 280 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 NSRP1Q9H0G5 558 aaKnown RBP13.06□□□□□ -0.32
CBWD3-217ENST00000621474 MRGBPQ9NV56 204 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 ADAM21Q9UKJ8 722 aa13.06□□□□□ -0.32
CBWD3-217ENST00000621474 BOKQ9UMX3 212 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-217ENST00000621474 NDUFAF1Q9Y375 327 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms