RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 C2orf72A6NCS6 295 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 OR6C70A6NIJ9 312 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 ERN1O75460 977 aaKnown RBP17.21■□□□□ 0.34
CDX1-202ENST00000616154 ATE1O95260 518 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 RAF1P04049 648 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 MPIP34949 423 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 OCRLQ01968 901 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 STX3Q13277 289 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 PRSS53Q2L4Q9 553 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 ARL13AQ5H913 290 aaPredicted RBP17.21■□□□□ 0.34
CDX1-202ENST00000616154 FBXW10Q5XX13 1052 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 ATG16L1Q676U5 607 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 ENPP6Q6UWR7 440 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 FAM9CQ8IZT9 166 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 OR2T11Q8NH01 316 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 OR14L1PQ8NHC6 308 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 DYDC1Q8WWB3 177 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 UCN2Q96RP3 112 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 TM9SF2Q99805 663 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 CCT7Q99832 543 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 C20orf27Q9GZN8 174 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 LRTM1Q9HBL6 345 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 POLR3HQ9Y535 204 aaPredicted RBP17.21■□□□□ 0.34
CDX1-202ENST00000616154 PTGDR2Q9Y5Y4 395 aa17.21■□□□□ 0.34
CDX1-202ENST00000616154 H0Y3Z8 333 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 PLOD2O00469 737 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 RGS14O43566 566 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 TBX19O60806 448 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 ABCB7O75027 752 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 RCBTB2O95199 551 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 PSMG1O95456 288 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 CHRNGP07510 517 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 CT45A8P0DMV1 189 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 CT45A9P0DMV2 189 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 FOSL1P15407 271 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 GYS2P54840 703 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 GFRA1P56159 465 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 ABCE1P61221 599 aaKnown RBP17.2■□□□□ 0.34
CDX1-202ENST00000616154 C2orf80Q0P641 193 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 FOXF2Q12947 444 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 CT45A2Q5DJT8 189 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 OR7G2Q8NG99 324 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 LRRC8CQ8TDW0 803 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 RNF138Q8WVD3 245 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 TMCO6Q96DC7 493 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 SLC35A4Q96G79 324 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 COL21A1Q96P44 957 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 SORT1Q99523 831 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 PLEKHF2Q9H8W4 249 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 THAP1Q9NVV9 213 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 TMED5Q9Y3A6 229 aa17.2■□□□□ 0.34
CDX1-202ENST00000616154 CLCA1A8K7I4 914 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 LSM1O15116 133 aaKnown RBP17.19■□□□□ 0.34
CDX1-202ENST00000616154 ITM2AO43736 263 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 CHEK2O96017 543 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 HOXB4P17483 251 aaPredicted RBP17.19■□□□□ 0.34
CDX1-202ENST00000616154 SRD5A2P31213 254 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 SLC1A6P48664 564 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 ADAM8P78325 824 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 PDE7AQ13946 482 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 DEFB113Q30KQ7 82 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 XKR7Q5GH72 579 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 IFNEQ86WN2 208 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 PLCZ1Q86YW0 608 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 PPP1R14CQ8TAE6 165 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 KAT2AQ92830 837 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 WNT2BQ93097 391 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 TMBIM1Q969X1 311 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 DTNBP1Q96EV8 351 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 YIPF4Q9BSR8 244 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 G6PC3Q9BUM1 346 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 RBM24Q9BX46 236 aaKnown RBP17.19■□□□□ 0.34
CDX1-202ENST00000616154 EML4Q9HC35 981 aaKnown RBP17.19■□□□□ 0.34
CDX1-202ENST00000616154 MIEF1Q9NQG6 463 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 PFDN4Q9NQP4 134 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 CLCF1Q9UBD9 225 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.19■□□□□ 0.34
CDX1-202ENST00000616154 TRAF6Q9Y4K3 522 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 WIF1Q9Y5W5 379 aa17.19■□□□□ 0.34
CDX1-202ENST00000616154 POLR3GO15318 223 aaPredicted RBP17.18■□□□□ 0.34
CDX1-202ENST00000616154 SEC22BO75396 215 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 REM1O75628 298 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 SDC1P18827 310 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 SRYQ05066 204 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 KEAP1Q14145 624 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 RFTN2Q52LD8 501 aaPredicted RBP17.18■□□□□ 0.34
CDX1-202ENST00000616154 OR2L13Q8N349 312 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 TWIST2Q8WVJ9 160 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 EGLN2Q96KS0 407 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 C7orf26Q96N11 449 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 AMDHD1Q96NU7 426 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 DACH2Q96NX9 599 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 ZNF317Q96PQ6 595 aaPredicted RBP17.18■□□□□ 0.34
CDX1-202ENST00000616154 BBS4Q96RK4 519 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 GLIPR2Q9H4G4 154 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 ZNF395Q9H8N7 513 aaPredicted RBP17.18■□□□□ 0.34
CDX1-202ENST00000616154 ANKRA2Q9H9E1 313 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 GALNT8Q9NY28 637 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 TAS2R10Q9NYW0 307 aa17.18■□□□□ 0.34
CDX1-202ENST00000616154 C19orf53Q9UNZ5 99 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms