RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 GRM7Q14831 915 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 LARS2Q15031 903 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 NSDHLQ15738 373 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 INAVAQ3KP66 663 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FHL5Q5TD97 284 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ARHGAP40Q5TG30 622 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PMS2CLQ68D20 193 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 XAF1Q6GPH4 301 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 POMZP3Q6PJE2 187 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF773Q6PK81 442 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 LANCL3Q6ZV70 420 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 C17orf82Q86X59 251 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 C1orf210Q8IVY1 113 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC30A8Q8IWU4 369 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 NRMQ8IXM6 262 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SAMD14Q8IZD0 417 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 MAML2Q8IZL2 1156 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 GHDCQ8N2G8 530 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CADM2Q8N3J6 435 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ARHGEF39Q8N4T4 335 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CDRT4Q8N9R6 151 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC38A9Q8NBW4 561 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SETD9Q8NE22 299 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 OR5M3Q8NGP4 307 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 OR4C3Q8NH37 302 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 C16orf52Q8NHV5 167 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FAM174AQ8TBP5 190 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RASSF5Q8WWW0 418 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CNOT9Q92600 299 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 C12orf43Q96C57 262 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 NRBF2Q96F24 287 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF764Q96H86 408 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 SENP5Q96HI0 755 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 HRASLS5Q96KN8 279 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RDH12Q96NR8 316 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 OR6C1Q96RD1 312 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 NDC1Q9BTX1 674 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ITPAQ9BY32 194 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PLA2G12AQ9BZM1 189 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 UCK2Q9BZX2 261 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 GABARAPL1Q9H0R8 117 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RBM38Q9H0Z9 239 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 PIGUQ9H490 435 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RERGLQ9H628 205 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MTHFD2LQ9H903 347 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 CACYBPQ9HB71 228 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 FOLH1BQ9HBA9 442 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 BCL2L10Q9HD36 194 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ATP13A2Q9NQ11 1180 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SCN3BQ9NY72 215 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PTGFRNQ9P2B2 879 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CTSFQ9UBX1 484 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RSL24D1Q9UHA3 163 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MRPS33Q9Y291 106 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 COMMD3-BMI1R4GMX3 469 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PNMA8CA0A1B0GUJ8 204 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SH3PXD2BA1X283 911 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PLOD3O60568 738 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ABCB7O75027 752 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ADAM11O75078 769 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ATE1O95260 518 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 NSA2O95478 260 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 S1PR1P21453 382 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 EPHA8P29322 1005 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 GGT2P36268 569 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 LIMS1P48059 325 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RXRGP48443 463 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 HMGA2P52926 109 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ARFIP1P53367 373 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 GINS1Q14691 196 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ARHGAP11BQ3KRB8 267 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RBM48Q5RL73 367 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 MANEAQ5SRI9 462 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC35F1Q5T1Q4 408 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PRPF38BQ5VTL8 546 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 FCRLBQ6BAA4 426 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF770Q6IQ21 691 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 ACSM5Q6NUN0 579 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SMARCD3Q6STE5 483 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 NPSR1Q6W5P4 371 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SHFQ7M4L6 423 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TMEM105Q8N8V8 129 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 NACC2Q96BF6 587 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MOAP1Q96BY2 351 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ISOC1Q96CN7 298 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SH3YL1Q96HL8 342 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 COPS4Q9BT78 406 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TWSG1Q9GZX9 223 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 OR10A5Q9H207 317 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 VCX3AQ9NNX9 186 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FLRT3Q9NZU0 649 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SERTAD3Q9UJW9 196 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PILRBQ9UKJ0 227 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 BLOC1S6Q9UL45 172 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CLDN16Q9Y5I7 305 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CLCA3PQ9Y6N3 262 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TEX51A0A1B0GUA7 166 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms