RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SSX1Q16384 188 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TCTN1Q2MV58 587 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PLK5Q496M5 336 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PRRT3Q5FWE3 981 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ANKRD54Q6NXT1 300 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 CHMP1BQ7LBR1 199 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 COMMD2Q86X83 199 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 SAMD14Q8IZD0 417 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 NANOGP1Q8N7R0 232 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 FBXO15Q8NCQ5 510 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 OR52E2Q8NGJ4 325 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TSACCQ96A04 125 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 ZMYND19Q96E35 227 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 DPCDQ9BVM2 203 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 POLDIP3Q9BY77 421 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 KLHL31Q9H511 634 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 NFKBIL1Q9UBC1 381 aaPredicted RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PPIEQ9UNP9 301 aaKnown RBP6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 PLEKHM1Q9Y4G2 1056 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 AP1M2Q9Y6Q5 423 aa6.45□□□□□ -1.38
SYNPO2-206ENST00000610556 TRAV27A0A087WT01 109 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 LCMT2O60294 686 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 LDB3O75112 727 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PPP1R3DO95685 299 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PAHP00439 452 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 AHCYP23526 432 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 UQCRC1P31930 480 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 CAPZA2P47755 286 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SOX9P48436 509 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 LSM11P83369 360 aaKnown RBP eCLIP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 CST6Q15828 149 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 FLYWCH1Q4VC44 716 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TP53I3Q53FA7 332 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TMEM35AQ53FP2 167 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC25A25Q6KCM7 469 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ASPGQ86U10 573 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 NKAIN4Q8IVV8 208 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SERPINA12Q8IW75 414 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 UBQLNLQ8IYU4 475 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 METTL27Q8N6F8 245 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 OR52E1Q8NGJ3 308 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TRMT10AQ8TBZ6 339 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 UCN3Q969E3 161 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 GAL3ST4Q96RP7 486 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PELI2Q9HAT8 420 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 GALNT9Q9HCQ5 603 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 MKKSQ9NPJ1 570 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 NANSQ9NR45 359 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 QPCTLQ9NXS2 382 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 NDRG2Q9UN36 371 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 AK6Q9Y3D8 172 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ALG5Q9Y673 324 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 LOC285556D6RIA3 1793 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 LCTP09848 1927 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 FAM25EA8MYX2 175 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PRRT4C9JH25 899 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 POLR1CO15160 346 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ARL6IP5O75915 188 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC2A10O95528 541 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF888P0CJ79 500 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SHC1P29353 583 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TRIM23P36406 574 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 CDC20Q12834 499 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ELOAQ14241 798 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 FAM205BPQ63HN1 556 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PPP2R2DQ66LE6 453 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TMEM215Q68D42 235 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF613Q6PF04 617 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 GID4Q8IVV7 300 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ZNF676Q8N7Q3 588 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 MRPL43Q8N983 215 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC16A11Q8NCK7 471 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 OR5K2Q8NHB8 316 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TSEN15Q8WW01 171 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ACOT11Q8WXI4 607 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC7A6Q92536 515 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 NKD1Q969G9 470 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SIPA1Q96FS4 1042 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SPACA7Q96KW9 195 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 KXD1Q9BQD3 176 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 THAP7Q9BT49 309 aaPredicted RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PINK1Q9BXM7 581 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ACTRT3Q9BYD9 372 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 OR52D1Q9H346 318 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 PHF11Q9UIL8 331 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 MGAT4AQ9UM21 535 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 DIMT1Q9UNQ2 313 aaKnown RBP6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ATG2BQ96BY7 2078 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TRBV2A0A0J9YWF9 115 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 TEX13CA0A0J9YWL9 993 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ANKRD34BA5PLL1 514 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 OR6C74A6NCV1 312 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ANXA2P2A6NMY6 339 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 KIAA0355O15063 1070 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 SLC19A2O60779 497 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 CSN2P05814 226 aa6.44□□□□□ -1.38
SYNPO2-206ENST00000610556 ANXA2P07355 339 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms