RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 CBR3O75828 277 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 KCNK2O95069 426 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 CPSF4O95639 269 aaKnown RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 ENDOUP21128 410 aaKnown RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 IL12AP29459 219 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 POU6F2P78424 691 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 C3P1Q6ZMU1 363 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 PLCZ1Q86YW0 608 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 WDSUB1Q8N9V3 476 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 FAM110BQ8TC76 370 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 ADAMTS15Q8TE58 950 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 CDS1Q92903 461 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 DTNBP1Q96EV8 351 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 CCDC120Q96HB5 630 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 MARK4Q96L34 752 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 PHF12Q96QT6 1004 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 VKORC1Q9BQB6 163 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 TP63Q9H3D4 680 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 FLRT3Q9NZU0 649 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 SPRR3Q9UBC9 169 aa15.37■□□□□ 0.05
TRIM28-215ENST00000601150 ASH1LQ9NR48 2969 aaKnown RBP15.37■□□□□ 0.05
TRIM28-215ENST00000601150 PHF3Q92576 2039 aaKnown RBP15.36■□□□□ 0.05
TRIM28-215ENST00000601150 NCOA6Q14686 2063 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-215ENST00000601150 C9JVG2 144 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 POLR3GO15318 223 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-215ENST00000601150 SLC22A3O75751 556 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 PGRP06401 933 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 LCN1P31025 176 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 IDH3AP50213 366 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 DGKQP52824 942 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 GRAMD1BQ3KR37 738 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 GXYLT1Q4G148 440 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 HSP90B2PQ58FF3 399 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 EMC4Q5J8M3 183 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 WLSQ5T9L3 541 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 FIGNL1Q6PIW4 674 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 RPTNQ6XPR3 784 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 C6orf120Q7Z4R8 191 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 OR5M9Q8NGP3 310 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 CCDC115Q96NT0 180 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 OR52E6Q96RD3 313 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 G6PC3Q9BUM1 346 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 TBL1XR1Q9BZK7 514 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 TCF7L2Q9NQB0 619 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 SDR39U1Q9NRG7 319 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-215ENST00000601150 PNPLA3Q9NST1 481 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 ZIM2Q9NZV7 527 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 PPP4R1LQ9P1A2 415 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 BTNL2Q9UIR0 455 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 ACAD8Q9UKU7 415 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 PCDHGB3Q9Y5G1 929 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 HRH3Q9Y5N1 445 aa15.36■□□□□ 0.05
TRIM28-215ENST00000601150 C15orf38-AP3S2A0A0A6YYH1 394 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 ADAM10O14672 748 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 IL6P05231 212 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 UQCRC2P22695 453 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 AQP5P55064 265 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 LRRC74AQ0VAA2 488 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 WIPI1Q5MNZ9 446 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 CCNJQ5T5M9 372 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 OR5M10Q6IEU7 315 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 GALNT10Q86SR1 603 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 YRDCQ86U90 279 aaKnown RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 CLEC4FQ8N1N0 589 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 MIER2Q8N344 545 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 ARFGAP2Q8N6H7 521 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 FAM83FQ8NEG4 500 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 OR4K17Q8NGC6 315 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 PHF10Q8WUB8 498 aaKnown RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 SLC35G5Q96KT7 338 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 OR7D2Q96RA2 312 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 DMRTA2Q96SC8 542 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 CCDC28BQ9BUN5 200 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 OR2B2Q9GZK3 357 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 TNFRSF10DQ9UBN6 386 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 SPTAN1Q13813 2472 aaKnown RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 UTP20O75691 2785 aaKnown RBP15.35■□□□□ 0.05
TRIM28-215ENST00000601150 ARHGAP21Q5T5U3 1957 aa15.35■□□□□ 0.05
TRIM28-215ENST00000601150 HECTD1Q9ULT8 2610 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 SPTBN1Q01082 2364 aaKnown RBP15.34■□□□□ 0.05
TRIM28-215ENST00000601150 A1L4Q6 167 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 DUXAA6NLW8 204 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 FIGNL2A6NMB9 653 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 NGFRP08138 427 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 ATP6V1C1P21283 382 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 MATN1P21941 496 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 SRD5A2P31213 254 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 SMSP52788 366 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 STX1BP61266 288 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 RPS26P62854 115 aaKnown RBP15.34■□□□□ 0.05
TRIM28-215ENST00000601150 ADORA2A-AS1P86434 159 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 STX5Q13190 355 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 EIPR1Q53HC9 387 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 ZNF585AQ6P3V2 769 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 ZAR1Q86SH2 424 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 MARCH3Q86UD3 253 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 OR4C3Q8NH37 302 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 OR14L1PQ8NHC6 308 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 GOT1L1Q8NHS2 421 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms