RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CCDC115Q96NT0 180 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 UCN2Q96RP3 112 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 PRPF18Q99633 342 aaKnown RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 TIMP4Q99727 224 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 TP63Q9H3D4 680 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 PIGUQ9H490 435 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 WDR55Q9H6Y2 383 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 C3orf14Q9HBI5 128 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 SDR39U1Q9NRG7 319 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 PNPLA3Q9NST1 481 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 NKIRAS1Q9NYS0 192 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 A0A1W2PQD3 144 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 TRPC5OSA6NMA1 111 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 C17orf51A8MQB3 221 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 PRSS44E7EML9 344 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 NPIPA2E9PIF3 369 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 NPIPA3F8WFD2 350 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 WDR1O75083 606 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 TGDSO95455 350 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 C6orf47O95873 294 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 TPOP07202 933 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 CPN1P15169 458 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 IGFBP2P18065 325 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 EFNA1P20827 205 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ACVR2AP27037 513 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 EPHA3P29320 983 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 CCT3P49368 545 aaKnown RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ZNHIT3Q15649 155 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF630Q2M218 657 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 LSM12Q3MHD2 195 aaKnown RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 VPS26BQ4G0F5 336 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SLC9B1Q4ZJI4 515 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SPANXN4Q5MJ08 99 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 DCST1Q5T197 706 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR4F3Q6IEY1 312 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 POMZP3Q6PJE2 187 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ANGPTL8Q6UXH0 198 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 C3P1Q6ZMU1 363 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SEM1Q6ZVN7 128 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 NCCRP1Q6ZVX7 275 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 EID3Q8N140 333 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 CHDHQ8NE62 594 aaPredicted RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR2M3Q8NG83 312 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR56A1Q8NGH5 318 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR1J4Q8NGS1 313 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR4C3Q8NH37 302 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 MGARPQ8TDB4 240 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 PIK3R3Q92569 461 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 MOAP1Q96BY2 351 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SARAFQ96BY9 339 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 WDYHV1Q96HA8 205 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 OR52B2Q96RD2 323 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 PAIP2Q9BPZ3 127 aaKnown RBP7.99□□□□□ -1.13
SSBP4-208ENST00000600628 G6PC3Q9BUM1 346 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 BTBD2Q9BX70 525 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 ACTRT3Q9BYD9 372 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SLC6A15Q9H2J7 730 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 METTL7AQ9H8H3 244 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 Q9N2J8 555 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SLCO1B3Q9NPD5 702 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SLC52A3Q9NQ40 469 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 SERHLQ9NQF3 203 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 FBXO34Q9NWN3 711 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 B4GALT7Q9UBV7 327 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 BTNL2Q9UIR0 455 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 FBXL2Q9UKC9 423 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 CELSR1Q9NYQ6 3014 aa7.99□□□□□ -1.13
SSBP4-208ENST00000600628 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 E9PBE3 544 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ETV2O00321 342 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 DNAJA2O60884 412 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 OXSR1O95747 527 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ACTL6AO96019 429 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GLI4P10075 376 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GABRA1P14867 456 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 HOXB9P17482 250 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 BMP7P18075 431 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 CHMP24386 653 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 PSMA4P25789 261 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GDF1P27539 372 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 HTR1EP28566 365 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GRNP28799 593 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 IL12BP29460 328 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 SRD5A2P31213 254 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 CEACAM8P31997 349 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GABRA3P34903 492 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 PTGER4P35408 488 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 KIR3DL1P43629 444 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 LHX2P50458 406 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 MVDP53602 400 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 PSMD4P55036 377 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 UFM1P61960 85 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GRAMD1BQ3KR37 738 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 PDCD4Q53EL6 469 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 KLHL26Q53HC5 615 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 EIPR1Q53HC9 387 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ANXA8L1Q5VT79 327 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 SAXO2Q658L1 398 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms