RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 EQTNQ9NQ60 294 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 INTS9Q9NV88 658 aaKnown RBP14.76□□□□□ -0.05
LSM4-206ENST00000600289 GPATCH2Q9NW75 528 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 USH1CQ9Y6N9 552 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 ABCA2Q9BZC7 2435 aa14.76□□□□□ -0.05
LSM4-206ENST00000600289 MYO7BQ6PIF6 2116 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GOLGA8QA0A0J9YX86 632 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GOLGA8OA6NCC3 632 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 E9PBE3 544 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GOLGA8NF8WBI6 632 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 CBR3O75828 277 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 TGDSO95455 350 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 TPOP07202 933 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 NGFRP08138 427 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 ALOX5P09917 674 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 IDO1P14902 403 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 AGAP20933 346 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 LRRC74AQ0VAA2 488 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 DUSP5Q16690 384 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GSTA3Q16772 222 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 PGS1Q32NB8 556 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 SLC9B1Q4ZJI4 515 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 PDCD4Q53EL6 469 aaKnown RBP14.75□□□□□ -0.05
LSM4-206ENST00000600289 BHLHB9Q6PI77 547 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 EPGNQ6UW88 154 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 SZRD1Q7Z422 152 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 PLCZ1Q86YW0 608 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 MCEMP1Q8IX19 187 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GLB1L3Q8NCI6 653 aaPredicted RBP14.75□□□□□ -0.05
LSM4-206ENST00000600289 SLC16A11Q8NCK7 471 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 VPS37AQ8NEZ2 397 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GPR151Q8TDV0 419 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 DYDC1Q8WWB3 177 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 CKAP2Q8WWK9 683 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 STON2Q8WXE9 905 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 GNRHR2Q96P88 292 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 ACTRT3Q9BYD9 372 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 PIGUQ9H490 435 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 LDAHQ9H6V9 325 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 HHATLQ9HCP6 504 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 MRPS18CQ9Y3D5 142 aaKnown RBP14.75□□□□□ -0.05
LSM4-206ENST00000600289 SNX8Q9Y5X2 465 aa14.75□□□□□ -0.05
LSM4-206ENST00000600289 PRSS51A0A1B0GVH4 220 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 GXYLT2A0PJZ3 443 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 GNB5O14775 395 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 ZNHIT1O43257 154 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 ZG16O60844 167 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 IGKV1D-16P01601 117 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 ESRRAP11474 423 aaPredicted RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 MRPL19P49406 292 aaKnown RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 PHC1P78364 1004 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 ADORA2A-AS1P86434 159 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 SPANXN4Q5MJ08 99 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 CLECL1Q8IZS7 167 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 ZNF808Q8N4W9 903 aaPredicted RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 GOT1L1Q8NHS2 421 aaPredicted RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 ITLN2Q8WWU7 325 aaPredicted RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 PIK3R3Q92569 461 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 SLC9A6Q92581 669 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 RMND5BQ96G75 393 aaPredicted RBP14.74□□□□□ -0.05
LSM4-206ENST00000600289 C16orf58Q96GQ5 468 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 MAGEB18Q96M61 343 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 BTBD2Q9BX70 525 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 OR2B2Q9GZK3 357 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 SLCO1B3Q9NPD5 702 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 SPRR3Q9UBC9 169 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 BTNL2Q9UIR0 455 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 SH3BGRL2Q9UJC5 107 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 HRH3Q9Y5N1 445 aa14.74□□□□□ -0.05
LSM4-206ENST00000600289 FIGNL2A6NMB9 653 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 NPIPA2E9PIF3 369 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 NPIPA3F8WFD2 350 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 CFLARO15519 480 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 WDR1O75083 606 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 KCNK2O95069 426 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 HOXD4P09016 255 aaPredicted RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 CLK3P49761 638 aaKnown RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 UFM1P61960 85 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 CRYZQ08257 329 aaKnown RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 TP53BP2Q13625 1128 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 LASP1Q14847 261 aaKnown RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 FAM174BQ3ZCQ3 159 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 SPDYE7PQ495Y7 208 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 GXYLT1Q4G148 440 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 COX18Q8N8Q8 333 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 FADS6Q8N9I5 356 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 MIPOL1Q8TD10 442 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 TEX37Q96LM6 180 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 CCDC115Q96NT0 180 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 OR52B2Q96RD2 323 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 G6PC3Q9BUM1 346 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 SDR39U1Q9NRG7 319 aaPredicted RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 SDHAF3Q9NRP4 125 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 PNPLA3Q9NST1 481 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 ZIM2Q9NZV7 527 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 PCDHGB4Q9UN71 923 aa14.73□□□□□ -0.05
LSM4-206ENST00000600289 FAF1Q9UNN5 650 aaPredicted RBP14.73□□□□□ -0.05
LSM4-206ENST00000600289 PCNX3Q9H6A9 2034 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms