RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ARFGAP2Q8N6H7 521 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 OR5D16Q8NGK9 328 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 FAM57AQ8TBR7 257 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 ADAMTS15Q8TE58 950 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 CCDC115Q96NT0 180 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 PHF12Q96QT6 1004 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 OR7D2Q96RA2 312 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 STACQ99469 402 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 PIGUQ9H490 435 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 EXO5Q9H790 373 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 NPHS2Q9NP85 383 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 DUSP22Q9NRW4 184 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 QPCTLQ9NXS2 382 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 ZGRF1Q86YA3 2104 aa13.88□□□□□ -0.19
LIG1-219ENST00000600055 A0A1B0GUH1 482 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 MATN1P21941 496 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 UQCRC2P22695 453 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 ELAVL4P26378 380 aaKnown RBP13.87□□□□□ -0.19
LIG1-219ENST00000600055 PSMD4P55036 377 aaKnown RBP13.87□□□□□ -0.19
LIG1-219ENST00000600055 CASP6P55212 293 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 STX5Q13190 355 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIG1-219ENST00000600055 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 EMC4Q5J8M3 183 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 GLB1L3Q8NCI6 653 aaPredicted RBP13.87□□□□□ -0.19
LIG1-219ENST00000600055 OR5M9Q8NGP3 310 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 OR4C3Q8NH37 302 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 GOT1L1Q8NHS2 421 aaPredicted RBP13.87□□□□□ -0.19
LIG1-219ENST00000600055 SLC35G5Q96KT7 338 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 BTBD2Q9BX70 525 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 ACKR4Q9NPB9 350 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 GIN1Q9NXP7 522 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 FBXL2Q9UKC9 423 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
LIG1-219ENST00000600055 NCKAP5O14513 1909 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 WIPF3A6NGB9 483 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 AQP7O14520 342 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 PRRG2O14669 202 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 SUSD5O60279 629 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 HCN1O60741 890 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 ZG16O60844 167 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 IL6P05231 212 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 HPNP05981 417 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 GSNP06396 782 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 CD1EP15812 388 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
LIG1-219ENST00000600055 SF3A3Q12874 501 aaKnown RBP eCLIP13.86□□□□□ -0.19
LIG1-219ENST00000600055 TIGD2Q4W5G0 525 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 WIPI1Q5MNZ9 446 aaPredicted RBP13.86□□□□□ -0.19
LIG1-219ENST00000600055 DCST2Q5T1A1 773 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 SAXO2Q658L1 398 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 BHLHB9Q6PI77 547 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 OLIG3Q7RTU3 272 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 YRDCQ86U90 279 aaKnown RBP13.86□□□□□ -0.19
LIG1-219ENST00000600055 PLCZ1Q86YW0 608 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 FAM83FQ8NEG4 500 aaPredicted RBP13.86□□□□□ -0.19
LIG1-219ENST00000600055 NEIL3Q8TAT5 605 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 CCDC120Q96HB5 630 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 OR51I1Q9H343 314 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 PPP4R1LQ9P1A2 415 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 ABCG2Q9UNQ0 655 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 SLC6A5Q9Y345 797 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 MYO18BQ8IUG5 2567 aa13.86□□□□□ -0.19
LIG1-219ENST00000600055 POLEQ07864 2286 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 NPIPA5A0A0B4J1W7 369 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 FAM234BA2RU67 622 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 CCDC154A6NI56 674 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 NPIPA7E9PJI5 369 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 CBR3O75828 277 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 OXSR1O95747 527 aaPredicted RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 KRT16P08779 473 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 NPIPA8P0DM63 369 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 TCEA1P23193 301 aaKnown RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 CHI3L1P36222 383 aaPredicted RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 MRPL19P49406 292 aaKnown RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 STX1BP61266 288 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 GXYLT1Q4G148 440 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 TNFAIP8L2Q6P589 184 aaPredicted RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 DNAJC14Q6Y2X3 702 aaPredicted RBP13.85□□□□□ -0.19
LIG1-219ENST00000600055 ZNF621Q6ZSS3 439 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 FUNDC1Q8IVP5 155 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 GATSQ8NAP1 163 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 DUSP19Q8WTR2 217 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 NEURL3Q96EH8 262 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 TBL1XR1Q9BZK7 514 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 DSN1Q9H410 356 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 SLC6A13Q9NSD5 602 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 FGFR1OP2Q9NVK5 253 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 MED11Q9P086 117 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 ACAD8Q9UKU7 415 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 MEMO1Q9Y316 297 aa13.85□□□□□ -0.19
LIG1-219ENST00000600055 C15orf38-AP3S2A0A0A6YYH1 394 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms